Pairwise Alignments

Query, 455 a.a., MBL fold hydrolase from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., Predicted exonuclease of the beta-lactamase fold involved in RNA processing from Pseudomonas stutzeri RCH2

 Score =  226 bits (576), Expect = 1e-63
 Identities = 156/446 (34%), Positives = 241/446 (54%), Gaps = 37/446 (8%)

Query: 24  GGKASVTGSCHELRA-DGQALLIDCGLFQGADERP----LAVEFALGHVDALILTHAHID 78
           G    VTGSC+ +   DG  +L++CG+ QG  E       A  F    +DA++L+HAHID
Sbjct: 8   GAIQQVTGSCYLIETHDGIRVLLECGMHQGRREEESDNRAAFAFDPTTLDAVVLSHAHID 67

Query: 79  HIGRLPWLLAAGLKQPIYSTAATAELVPLMLEDGLKLQ-------------LGMSPKQSE 125
           H G LP L+A G + P++ T ATAEL+ LML D  ++Q             +G    Q  
Sbjct: 68  HSGLLPRLVALGYRGPVHCTDATAELLELMLLDSAQIQEKDAEWENKWRARIGKPMIQPL 127

Query: 126 RVLTEVRRLLRVQD---YQKWFAVQPKRADSLWVRFQPAGHILGSAYVEIR-RPNGEV-- 179
               +  R+L  ++   Y + F V    A  + V F  AGHILGS+ V++    +G    
Sbjct: 128 YTRVDAERMLSQREPHAYGETFEV----AQGVVVTFHDAGHILGSSIVQMDVSDHGRTRR 183

Query: 180 VVFSGDLGPSHTPLLPDPQSPERADYLFIETTYGDKQHEDVQSRGQRLRAMIERSLTDGG 239
           +VFSGDLG + +PL+  P   + AD + +E+TYGD+ H   +   + L  +++++  DGG
Sbjct: 184 LVFSGDLGNACSPLMHPPTVLKEADVVLMESTYGDRDHRSHEDTVEELAGILQQAHRDGG 243

Query: 240 AILIPAFSVGRTQELLFDIEQLIFSQQIDANLPIILDSPMAQRVTRSYRRFK-QLWGREA 298
            +L+P+F+VGRTQ+L++ + +     ++     + LDSPMA      Y  +K QL     
Sbjct: 244 NVLMPSFAVGRTQDLIYYLGRFYREGRLPQQA-VFLDSPMAIGANAIYSHYKDQLDLNGI 302

Query: 299 KARLQMHRHPLAFEQCITV-EDHRTHER--LVNRLASTGEAAIVVAASGMCQGGRIMDYL 355
            A L      L  E+ + + +   T E    +NR  S     I++A SGMC GGRI+ + 
Sbjct: 303 DAALSGTSGKLYAERWLPILKPTPTPEESMAINRFKS---GVIIIAGSGMCTGGRILHHF 359

Query: 356 KALLPDKRTDLILAGFQAEGTLGRSIQSGQPSVWIEGTEVEVNAHIHTMSGYSAHADKAD 415
           K  L  +   L++ GFQA GTLGR+I  G  SV +    + VNA IHT+ G+SAHA ++ 
Sbjct: 360 KHNLWREECHLVIPGFQARGTLGRAIVDGAGSVKLLHQRIAVNAKIHTLGGFSAHAGQSQ 419

Query: 416 LLRFITGIPEKPKQVHLIHGEAPAKQ 441
           L+ +++    +P +++L+HGE    Q
Sbjct: 420 LIDWVSNFENRP-ELYLVHGELEKMQ 444