Pairwise Alignments

Query, 621 a.a., polysaccharide biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., nucleotide sugar epimerase/dehydratase WbpM from Pseudomonas fluorescens FW300-N2E2

 Score =  527 bits (1357), Expect = e-154
 Identities = 299/642 (46%), Positives = 409/642 (63%), Gaps = 31/642 (4%)

Query: 8   LLSAQRHHKRMITLLYDVFALMFSLYAAIALRLDTLAFTFSFPEFLSMMTTVGV-TLYCF 66
           LL   R HKR I +  DV  +  +L+ A  +RL    +       L +  +  V  +  F
Sbjct: 32  LLGLPRRHKRAIQVATDVVLVWAALWLAFVVRLGIDIWATPIETHLWLFASAPVIAIPIF 91

Query: 67  VRLGMYRAVLRYMMLPAIGYIFLSVIISAVTLALSGFFFQ---AFIPRSVPFIYAGLATL 123
           +R GMYRAV+RY    A+  I  +V +SA+ LAL  +++      +PRS+ F +  L+ +
Sbjct: 92  IRFGMYRAVMRYFGNDALITISKAVSLSALLLALVVYWYSNHTTLVPRSIIFNFWWLSLI 151

Query: 124 TLGGPRIFIRTIYYH----------YYKRQK--PNVFIYGAGSTGRDLAYALIQGDEYHP 171
            LGG R+ +R  +            +  R    P V IYGAG+ G  L  AL  G    P
Sbjct: 152 MLGGLRLVMRQYFLGDWFSAAQHVPFANRDDGLPKVAIYGAGAAGNQLVAALRMGRVMRP 211

Query: 172 VIFLDDDPAKTGQIIFGLRVHHSSDFESLRNLYEPVKMLIAINNIGKNTRIKLLERLSHW 231
           V F+DDD +   ++I GL+V+     + + +     ++L+A+ +  +  R ++L  L  +
Sbjct: 212 VAFIDDDRSIADRVIAGLQVYQPKHIQKMIDATGAQEILLAVPSSSRGRRREILTLLEGF 271

Query: 232 PIEIQSVPSVEDIAAGRAKATDVQDLDIADLLGRAPVEPDLALLQKNITEKSVMVTGAGG 291
           P+ ++SVP   D+A+GR K  D+Q++DIADLLGR  V     LL+  I  +SV+VTGAGG
Sbjct: 272 PLHVRSVPGFMDLASGRVKVDDIQEVDIADLLGRDSVPAQADLLEHCIAGQSVLVTGAGG 331

Query: 292 SIGSELCRQILAQKPKTLVLFELNEYNLYTIDQELQAIKQNLKLNTKIVAALGSVQRENR 351
           SIGSELCRQILA +P TL+L+E +E+NLY+I  EL+       L+ +++  LGSV+ EN+
Sbjct: 332 SIGSELCRQILALQPTTLLLYEHSEFNLYSILSELEPRIARESLSVRVLPILGSVRDENK 391

Query: 352 VKKLMQAHQVETVYHAAAYKHVPLVEDNVIEGIRNNVFGTLACANAAIEAGVKNFTLIST 411
           +  +M+   V TVYHAAAYKHVP+VE N+ EG+ NNV GTL  A AA++AGV NF LIST
Sbjct: 392 LLDVMKTWSVNTVYHAAAYKHVPMVEHNIAEGVLNNVIGTLNTAQAALQAGVSNFVLIST 451

Query: 412 DKAVRPTNIMGASKRMAELVLQALA--------------DKNSTTIFTMVRFGNVLGSSG 457
           DKAVRPTN+MG++KR+AEL LQAL+               + + T FTMVRFGNVLGSSG
Sbjct: 452 DKAVRPTNVMGSTKRLAELTLQALSRELAPVLFGDRANVSRVNKTRFTMVRFGNVLGSSG 511

Query: 458 SVVPLFKKQIRAGGPVTVTHPDIIRYFMLIPEAAQLVIQAGAMSHNGQVFVLDMGEPVKI 517
           SV+PLF KQI++GGP+TVTHP I RYFM IPEAAQLVIQAG+M   G VFVLDMGEPVKI
Sbjct: 512 SVIPLFHKQIKSGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGLGGDVFVLDMGEPVKI 571

Query: 518 VDLAKRMIHLMGMKEFCDGRSDEGDIEIKFTGLRPGEKLYEELLIGENVEGTSHQKIMTA 577
           ++LA++MIHL G+    + ++  GDI I+FTGLRPGEKLYEELLIG NV  T H  IM+A
Sbjct: 572 IELAEKMIHLSGLSVRSE-KNPHGDISIEFTGLRPGEKLYEELLIGNNVVATQHPMIMSA 630

Query: 578 CEEKLSWDAMEDLLTELDVCCHNFDVECIKRILLDAPTGYSP 619
            E+ L W+ ++  LTEL       D   ++++L D  +GY+P
Sbjct: 631 NEDHLPWELLKASLTELLAAIDRDDYARVRQLLRDTVSGYAP 672