Pairwise Alignments

Query, 621 a.a., polysaccharide biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 664 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E3

 Score =  518 bits (1335), Expect = e-151
 Identities = 296/645 (45%), Positives = 417/645 (64%), Gaps = 37/645 (5%)

Query: 8   LLSAQRHHKRMITLLYDVFALMFSLYAAIALRL--DTLAFTFSFPEFLSMMTTVGVTLYC 65
           LL   R  KR+I ++ D+  +  +L+ A  +RL  D +A       +L     V + +  
Sbjct: 8   LLGLPRRKKRLIQVITDMVLVWVALWLAFIVRLGIDEMATPLKIHLWLFACAPV-IAIPL 66

Query: 66  FVRLGMYRAVLRYMMLPAIGYIFLSVIISAVTLALSGFFF---QAFIPRSVPFIYAGLAT 122
           F+R GMYRAV+RY    A+  I  +V +S++ LA+  +++   Q  +PRS+ F Y  L+ 
Sbjct: 67  FIRFGMYRAVMRYFGNDALIAIVKAVSLSSLILAVIVYWYSNHQVVVPRSIIFNYWWLSL 126

Query: 123 LTLGGPRIFIRTIY---YHYYKRQKP---------NVFIYGAGSTGRDLAYALIQGDEYH 170
           + +GG R+ +R  +   +    +  P          V IYGAG  G  L  AL  G    
Sbjct: 127 VIIGGLRLCMRQYFMGDWFTAAQHVPFTNRDDGLTKVAIYGAGVAGNQLVAALRMGRVMR 186

Query: 171 PVIFLDDDPAKTGQIIFGLRVHHSSDFESLRNLYEPVKMLIAINNIGKNTRIKLLERLSH 230
           PV F+DDD +   + I GL+V+     + + ++    ++L+A+ +  +  R ++L  L  
Sbjct: 187 PVAFIDDDASIADRSISGLQVYKPKHIQQMIDVTGAQEILLALPSSTRARRREILNLLEG 246

Query: 231 WPIEIQSVPSVEDIAAGRAKATDVQDLDIADLLGR--APVEPDLALLQKNITEKSVMVTG 288
           +P+ I+SVP+  D+A+GR K  D+Q++DIADLLGR   P +PDL  L++ I  K+VMVTG
Sbjct: 247 FPLHIRSVPNFTDLASGRVKVEDIQEVDIADLLGRDSVPAQPDL--LERCIKRKTVMVTG 304

Query: 289 AGGSIGSELCRQILAQKPKTLVLFELNEYNLYTIDQELQAIKQNLKLNTKIVAALGSVQR 348
           AGGSIG+ELCRQI +  P TL+LFE +E+NLY+I  EL+       L+ +++  LGSV+ 
Sbjct: 305 AGGSIGAELCRQIFSLGPTTLILFEHSEFNLYSILSELEKRASRESLSVRLLPILGSVRH 364

Query: 349 ENRVKKLMQAHQVETVYHAAAYKHVPLVEDNVIEGIRNNVFGTLACANAAIEAGVKNFTL 408
           ++++  +M+  +VETVYHAAAYKHVP+VE N+ EG+ NNV GTL  A AA+++GV NF L
Sbjct: 365 QDKLLDVMKTWKVETVYHAAAYKHVPMVEHNIAEGVLNNVMGTLNTAQAALQSGVANFVL 424

Query: 409 ISTDKAVRPTNIMGASKRMAELVLQALA--------------DKNSTTIFTMVRFGNVLG 454
           ISTDKAVRPTN+MG++KR+AE+ LQAL+               + + T FTMVRFGNVLG
Sbjct: 425 ISTDKAVRPTNVMGSTKRLAEMTLQALSREIAPVLLGDKANVSRVNKTRFTMVRFGNVLG 484

Query: 455 SSGSVVPLFKKQIRAGGPVTVTHPDIIRYFMLIPEAAQLVIQAGAMSHNGQVFVLDMGEP 514
           SSGSV+PLF  QI++GGP+TVTHP I RYFM IPEAAQLVIQAG+M   G VFVLDMGEP
Sbjct: 485 SSGSVIPLFHSQIKSGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGEP 544

Query: 515 VKIVDLAKRMIHLMGMKEFCDGRSDEGDIEIKFTGLRPGEKLYEELLIGENVEGTSHQKI 574
           VKIV+LA++MIHL G+      ++ +GDI I+FTGLRPGEKLYEELLIG+NV  T H  I
Sbjct: 545 VKIVELAEKMIHLSGL-SIRSEKNLQGDIAIEFTGLRPGEKLYEELLIGDNVAATQHPMI 603

Query: 575 MTACEEKLSWDAMEDLLTELDVCCHNFDVECIKRILLDAPTGYSP 619
           M+A E+ L WD ++  LTEL       D   ++++L +  +GY+P
Sbjct: 604 MSANEDHLPWDVLKTRLTELLGAVERDDYSRVRQLLRETVSGYTP 648