Pairwise Alignments

Query, 621 a.a., polysaccharide biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 742 a.a., nucleotide sugar epimerase/dehydratase WbpM from Pseudomonas fluorescens FW300-N1B4

 Score =  498 bits (1283), Expect = e-145
 Identities = 275/578 (47%), Positives = 383/578 (66%), Gaps = 30/578 (5%)

Query: 71  MYRAVLRYMMLPAIGYIFLSVIISAVTLALSGFFF---QAFIPRSVPFIYAGLATLTLGG 127
           MYRAV+RY    A+  I  +V +S++ LA+  +++   Q  +PRS+ F Y  L+ + +GG
Sbjct: 1   MYRAVMRYFGNDALIAIVKAVSLSSLILAVVVYWYSNHQTVVPRSIIFNYWWLSMVIIGG 60

Query: 128 PRIFIRTIY---YHYYKRQKP---------NVFIYGAGSTGRDLAYALIQGDEYHPVIFL 175
            R+ +R  +   +    +  P          V IYGAG  G  L  AL  G    PV F+
Sbjct: 61  LRLCMRQYFMGDWFTAAQHVPFTSRDDGLTKVAIYGAGVAGNQLVAALRMGRVMRPVAFI 120

Query: 176 DDDPAKTGQIIFGLRVHHSSDFESLRNLYEPVKMLIAINNIGKNTRIKLLERLSHWPIEI 235
           DDD +   + I GL+V+     + + ++    ++L+A+ +  +  R ++L  L  +P+ +
Sbjct: 121 DDDSSIADRSISGLQVYKPKHIQQMIDVTGAQEILLALPSSTRARRREILNLLEGYPLHV 180

Query: 236 QSVPSVEDIAAGRAKATDVQDLDIADLLGRAPVEPDLALLQKNITEKSVMVTGAGGSIGS 295
           +SVP+  D+A+GR K  D+Q++DIADLLGR  V     LL++ I  K+VMVTGAGGSIGS
Sbjct: 181 RSVPNFTDLASGRVKVEDIQEVDIADLLGRDAVPAQADLLERCIKGKTVMVTGAGGSIGS 240

Query: 296 ELCRQILAQKPKTLVLFELNEYNLYTIDQELQAIKQNLKLNTKIVAALGSVQRENRVKKL 355
           ELCRQI +  P TL+LFE +E+NLY+I  EL+       ++ +++  LGS++  +++  +
Sbjct: 241 ELCRQIFSLGPTTLLLFEHSEFNLYSILSELEQRASRESVSVQLLPILGSIRHPHKLLDV 300

Query: 356 MQAHQVETVYHAAAYKHVPLVEDNVIEGIRNNVFGTLACANAAIEAGVKNFTLISTDKAV 415
           M+  +V+TVYHAAAYKHVP+VE N+ EG+ NNV GTL  A AA+++GV NF LISTDKAV
Sbjct: 301 MKTWRVDTVYHAAAYKHVPMVEHNIAEGVLNNVIGTLNTAQAALQSGVANFVLISTDKAV 360

Query: 416 RPTNIMGASKRMAELVLQALA--------------DKNSTTIFTMVRFGNVLGSSGSVVP 461
           RPTNIMG++KR+AEL LQAL+               + + T FTMVRFGNVLGSSGSV+P
Sbjct: 361 RPTNIMGSTKRLAELTLQALSREIAPVLFGDKANVSRVNKTRFTMVRFGNVLGSSGSVIP 420

Query: 462 LFKKQIRAGGPVTVTHPDIIRYFMLIPEAAQLVIQAGAMSHNGQVFVLDMGEPVKIVDLA 521
           LF  QI++GGP+TVTHP I RYFM IPEAAQLVIQAG+M   G VFVLDMGEPV+IV+LA
Sbjct: 421 LFHSQIKSGGPLTVTHPKITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGEPVRIVELA 480

Query: 522 KRMIHLMGMKEFCDGRSDEGDIEIKFTGLRPGEKLYEELLIGENVEGTSHQKIMTACEEK 581
           ++MIHL G+      R+ +GDI I+FTGLRPGEKLYEELLIG+NV  T H  IMTA E+ 
Sbjct: 481 EKMIHLSGL-SIRSERNPQGDISIEFTGLRPGEKLYEELLIGDNVAATPHPMIMTANEDH 539

Query: 582 LSWDAMEDLLTELDVCCHNFDVECIKRILLDAPTGYSP 619
           L WD ++  LT+L +     D   ++++L +  +GY+P
Sbjct: 540 LPWDVLKSRLTDLLLAVEQDDYSRVRQLLRETVSGYTP 577