Pairwise Alignments

Query, 621 a.a., polysaccharide biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., Nucleoside-diphosphate-sugar epimerases from Pseudomonas stutzeri RCH2

 Score = 45.8 bits (107), Expect = 3e-09
 Identities = 56/242 (23%), Positives = 96/242 (39%), Gaps = 39/242 (16%)

Query: 279 ITEKSVMVTGAGGSIGSELCRQILAQKPKTLVLFELNEYNLYTIDQELQAIKQNLKLNTK 338
           + +  ++VTG  G IGS L   +LA+     VL  L+      + Q+++ I         
Sbjct: 1   MVDAPILVTGGAGFIGSNLVDALLARGYAVRVLDNLSTGKRENLPQDVELI--------- 51

Query: 339 IVAALGSVQRENRVKKLMQAHQVETVYHAAAYKHVPLVEDNVIEGIRNNVFGTLACANAA 398
               +G V   + V++ +Q      V H AA   V    D+ I   ++N+ GTL    A 
Sbjct: 52  ----VGDVADADCVRRAVQG--CRAVVHLAAVASVQASVDDPIGTHQSNLVGTLNLCEAM 105

Query: 399 IEAGVKNFTLIST---------------DKAVRPTNIMGASKRMAELVLQALADKNSTTI 443
            EAGVK     S+               D    P     A K  +E  L     ++    
Sbjct: 106 REAGVKRVLFASSAAVYGNNGEGQAIDEDTPKAPLTPYAADKLASEHYLDFYRRQHGLEP 165

Query: 444 FTMVRFGNVLGSS-------GSVVPLFKKQIRAGGPVTV-THPDIIRYFMLIPEAAQLVI 495
             + RF N+ G           V+ +F ++ + G P+ V    +  R F+ + +  ++++
Sbjct: 166 -VVFRFFNIFGPRQDPSSPYSGVISIFTERAQKGLPIAVFGDGEQTRDFVYVGDLVEVLV 224

Query: 496 QA 497
           QA
Sbjct: 225 QA 226