Pairwise Alignments

Query, 621 a.a., polysaccharide biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., flagellin modification protein FlmA from Azospirillum brasilense Sp245

 Score =  142 bits (357), Expect = 3e-38
 Identities = 92/292 (31%), Positives = 152/292 (52%), Gaps = 27/292 (9%)

Query: 282 KSVMVTGAGGSIGSELCRQILAQ-KPKTLVLFELNEYNLYTIDQELQAIKQNLKLNTKIV 340
           +S++VTG  GS G      +L    P+ +++F  +E+  Y + Q+L          + + 
Sbjct: 5   QSILVTGGSGSFGKRFVETVLRHASPRRVIVFSRDEFKQYEMQQQLGP-----DWASTLR 59

Query: 341 AALGSVQRENRVKKLMQAHQVETVYHAAAYKHVPLVEDNVIEGIRNNVFGTLACANAAIE 400
             +G V+   R++  M+  +V+   HAAA KHVP  E N +E I  NV+G      AA+ 
Sbjct: 60  FFIGDVRDRERLELAMR--EVDVCVHAAALKHVPAAEYNPMECIHTNVYGAENVVRAALN 117

Query: 401 AGVKNFTLISTDKAVRPTNIMGASKRMAELVLQALADKNST--TIFTMVRFGNVLGSSGS 458
            GVK    +STDKA  P N+ GASK  ++ +  A  + + +  T F++VR+GNV+GS GS
Sbjct: 118 TGVKRVIALSTDKAANPVNLYGASKLASDKIFIAANNLSGSLGTRFSVVRYGNVVGSRGS 177

Query: 459 VVPLFKKQIRAGG-PVTVTHPDIIRYFMLIPEAAQLVIQAGAMSHNGQVFVLDMGEPVKI 517
           V+PLF++ I  G   + VT   + R+++ +      V+   AM   G++FV  +   ++I
Sbjct: 178 VIPLFRRMIAEGAESLPVTDDRMTRFWITLQHGVDFVVSCIAMMQGGEIFVPKI-PSMRI 236

Query: 518 VDLAKRMIHLMGMKEFCDGRSDEGDIEIKFTGLRPGEKLYEELLIGENVEGT 569
            DLA+ M   +  K+                G+RPGEKL+E ++  ++   T
Sbjct: 237 TDLARAMAPHLPHKQ---------------VGIRPGEKLHEVMITEDDSRQT 273