Pairwise Alignments

Query, 621 a.a., polysaccharide biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 700 a.a., nucleotide sugar epimerase dehydratase from Sinorhizobium meliloti 1021

 Score =  259 bits (661), Expect = 4e-73
 Identities = 197/581 (33%), Positives = 297/581 (51%), Gaps = 56/581 (9%)

Query: 22  LYDVFALMFSLYAAIALRLDTLAFTFSFPEFLSMMTTVG-----VTLYCFVRLGMYRAVL 76
           L D+ ++  +L  A+ LR      + + PE  S++   G     +    F   G+Y    
Sbjct: 33  LTDLASVGVALAMALLLRYGVEELS-ARPETASVLLWSGAQYLTICALVFPLSGLYSRNW 91

Query: 77  RYMMLPAIGYIFLSVIISAVTLALSGFFFQAF--IPRSVPFIYAGLATLTLGGPRIFIRT 134
           +Y  +  +  I  +V+++++ L    FF      IPR+V  + + L    L   R+  R 
Sbjct: 92  KYGSVSDLFIILRAVLLTSLLLVSLLFFSTRLTDIPRTVVPMQSLLLIAFLAAARLSFRA 151

Query: 135 --------IYYHYYKRQKPN-----VFIYGAGSTGRDLAYALIQGDE---YHPVIFLDDD 178
                   ++     R   +     + + GA S   DL    +  D    Y PV  LD  
Sbjct: 152 EELALRRPVFKSGRSRDAQDDNRIPLLLIGA-SDAADLYLRALARDPNATYTPVACLDRS 210

Query: 179 PAKTGQIIFGLRVH-HSSDFE----SLRNLYEPVKMLI---AINNIGKNTRIKLLERLSH 230
             +TG  + G+ +     DFE     L+   +  + ++   A    G+     LL     
Sbjct: 211 EDQTGMSLRGVPIAGRIQDFERVVAELQQQGKQPRHIVFTEAPAAFGEEASDGLLRSAER 270

Query: 231 WPIEIQSVPSVEDIAAGRA-KATDVQDLDIADLLGRAPVEPDLALLQKNITEKSVMVTGA 289
             I +  +  + ++   +     +++ +++ DLL R     D   + + +  + V++TGA
Sbjct: 271 LGIAVSRLSQMTELKRAKGDNPYELRSIELTDLLERPQAALDREAIGRLVRGRRVLITGA 330

Query: 290 GGSIGSELCRQILAQKPKTLVLFELNEYNLYTIDQELQAIKQNLKLNTKIVAALGSVQRE 349
           GGSIGSEL  Q+ A +P  +VL +  EYNLY ID  L      L       + L SV+R 
Sbjct: 331 GGSIGSELTAQVAACEPAEIVLIDNTEYNLYAIDMTLTESFPELPR----WSYLCSVRRS 386

Query: 350 NRVKKLMQAHQVETVYHAAAYKHVPLVEDNVIEGIRNNVFGTLACANAAIEAGVKNFTLI 409
            RV+++ + H+ E V+HAAA KHVP+V+ N  EG+  NV GT+  ANAA + G      +
Sbjct: 387 QRVEEIFERHRPELVFHAAALKHVPMVQMNPCEGVLTNVVGTMNVANAAKKYGTLAMVQV 446

Query: 410 STDKAVRPTNIMGASKRMAELVLQALADKNSTTI-----FTMVRFGNVLGSSGSVVPLFK 464
           STDK V  T++MGA+KR+AEL  QAL D N         F  VRFGNVLGSSGS++PLFK
Sbjct: 447 STDKVVNSTSVMGATKRLAELYCQAL-DLNGLETGLGPRFMTVRFGNVLGSSGSLIPLFK 505

Query: 465 KQIRAGGPVTVTHPDIIRYFMLIPEAAQLVIQAGAMSH-----NGQVFVLDMGEPVKIVD 519
           +Q+  GGP+TVT  ++ R+FM I EA +L +QA A         G++FVLDMGEP+KI+D
Sbjct: 506 RQLARGGPLTVTDANMTRFFMTIREAVELTLQASAYGFEKQLGQGEIFVLDMGEPIKIID 565

Query: 520 LAKRMIHLMGMKEFCDGRSDEGDIEIKFTGLRPGEKLYEEL 560
           +A+RMI L G        + + +IEIK  G RPGEKL+EEL
Sbjct: 566 IARRMIRLAGF-------TPDQEIEIKIIGCRPGEKLFEEL 599