Pairwise Alignments

Query, 621 a.a., polysaccharide biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 615 a.a., putative capsular polysaccharide biosynthesis protein from Phaeobacter inhibens DSM 17395

 Score =  385 bits (989), Expect = e-111
 Identities = 226/506 (44%), Positives = 310/506 (61%), Gaps = 14/506 (2%)

Query: 80  MLPAIGYIFLSVIISAVTLALSGFFFQAFIPRSVPFIYAGLATLTLGGPRIFIRTIYYHY 139
           MLP + Y+    + + V L L        +P     ++A    L L   R  +  +    
Sbjct: 78  MLPVLPYVL--AVSAGVALWLG-------LPPGTHVVFATTYFLCLLAARAVLYQVVVAI 128

Query: 140 YKRQKPN--VFIYGAGSTGRDLAYALIQGDEYHPVIFLDDDPAKTGQIIFGLRVHHSSDF 197
           Y+R +P   V IYGAG+TG  LA AL   D   PV F+DD+ +  G  + GL V   +  
Sbjct: 129 YRRAQPRCRVLIYGAGTTGAQLAQALKAHDGIDPVAFVDDNTSLQGVTLVGLPVFPPARI 188

Query: 198 ESLRNLYEPVKMLIAINNIGKNTRIKLLERLSHWPIEIQSVPSVEDIAAGRAKATDVQDL 257
             +    +  ++L+A+ +  +  + ++++RL    +E+Q++PS   +    A    +  +
Sbjct: 189 AEIAEARQIKRVLLAMPSQSQPKQAQIIQRLQRMQLEVQALPSFAQLIGEEALVDKLTPV 248

Query: 258 DIADLLGRAPVEPDLALLQKNITEKSVMVTGAGGSIGSELCRQILAQKPKTLVLFELNEY 317
              + LGRA  +  L     +  ++ V+V+GAGGSIGSELCRQ+LA +P+ LVL+EL+E 
Sbjct: 249 APQNFLGRATRDVPLQEASGSYQDRVVLVSGAGGSIGSELCRQVLACRPRKLVLYELSEL 308

Query: 318 NLYTIDQELQAIKQNLKLNTKIVAALGSVQRENRVKKLMQAHQVETVYHAAAYKHVPLVE 377
            LYTI QEL+   +   +   +V  LGSV    +V+ ++  H V+ V HAAAYKHVPLVE
Sbjct: 309 ALYTIHQELEQQVEGTGIT--LVPVLGSVTDPRQVRMVLAHHGVQVVLHAAAYKHVPLVE 366

Query: 378 DNVIEGIRNNVFGTLACANAAIEAGVKNFTLISTDKAVRPTNIMGASKRMAELVLQALAD 437
            N + G+ NNVFGT   A AA  +GV+ F LIS+DKAVRPTN+MGASKRMAELV+Q L+ 
Sbjct: 367 ANPLPGLANNVFGTQTLARAAARSGVERFILISSDKAVRPTNVMGASKRMAELVVQDLST 426

Query: 438 KNSTTIFTMVRFGNVLGSSGSVVPLFKKQIRAGGPVTVTHPDIIRYFMLIPEAAQLVIQA 497
           +N  T+FTMVRFGNVLGSSGSVVPLF++QI  GGPVTVT P + RYFM I EA QLV+QA
Sbjct: 427 RNPGTVFTMVRFGNVLGSSGSVVPLFQEQISRGGPVTVTDPRVKRYFMTIREAVQLVLQA 486

Query: 498 GAMSHNGQVFVLDMGEPVKIVDLAKRMIHLMGMKEFCDGRSDEGDIEIKFTGLRPGEKLY 557
           GA +  G+VFVLDMGEP+ I+ LA+++I   G     D    +GDI I   GLRPGEK+ 
Sbjct: 487 GAEALGGEVFVLDMGEPISILQLARQVIESAGY-SVRDEDHPDGDIAIDIIGLRPGEKMQ 545

Query: 558 EELLIGENVEGTSHQKIMTACEEKLS 583
           EEL +  ++  T HQKI  A E  LS
Sbjct: 546 EELTLSSDLITTRHQKIFCAREAVLS 571