Pairwise Alignments

Query, 621 a.a., polysaccharide biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., UDP-glucose 4-epimerase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 52.0 bits (123), Expect = 4e-11
 Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 20/190 (10%)

Query: 283 SVMVTGAGGSIGSELCRQILAQKPKTLVLFELNEYNLYTIDQELQAIKQNLKLNTKIVAA 342
           +++VTG  G IG+    ++L    + +VL  L+  ++  +D+  +   +++         
Sbjct: 2   TILVTGGAGYIGTHTVVELLNAGSEVIVLDNLSNSSIEALDRVERITGKSVTFYQ----- 56

Query: 343 LGSVQRENRVKKLMQAHQVETVYHAAAYKHVPLVEDNVIEGIRNNVFGTLACANAAIEAG 402
            G +  +  ++K+   H ++ V H A  K V       ++   NNV GTL       E  
Sbjct: 57  -GDILNKALLQKVFSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFK 115

Query: 403 VKNFTLIST-----DKAVRP---------TNIMGASKRMAELVLQALADKNSTTIFTMVR 448
           VKN    S+     D A  P         TN  G SK M E +L  L   + +     +R
Sbjct: 116 VKNLVFSSSATVYGDPASLPITEDFPTGATNPYGQSKLMVEHILADLHHSDPSWNIARLR 175

Query: 449 FGNVLGSSGS 458
           + N +G+  S
Sbjct: 176 YFNPVGAHAS 185