Pairwise Alignments

Query, 370 a.a., glycosyl transferase family 1 from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., putative glycosyltransferase involved in lipopolysaccharide biosynthesis (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  155 bits (393), Expect = 1e-42
 Identities = 118/372 (31%), Positives = 198/372 (53%), Gaps = 14/372 (3%)

Query: 1   MKVLHVYRTCYPETKGGVEQVIRFIASGTKPLGIETKILTLSDNQTSSYYC---EGTEII 57
           M++L + +  YP  +GG+E+V+  I  G     +   +L  S  +         +   I+
Sbjct: 1   MRILQIGKF-YP-IRGGIEKVMYDITMGLSQRQVYCDMLCASAEKQKPENLLLNDYARIL 58

Query: 58  SVKKSIEISSNGFSWKLIRQFKKLSKWADIIHYHYPWPTGDF-LSLFGSSNPSIVTYHSD 116
            V    ++++   S  +I + +K++K  DIIH H+P P     L L G   P ++ +HSD
Sbjct: 59  CVSTWKKVAATMLSPAMIFRLRKINKEYDIIHIHHPDPMACLALFLSGYKGPVVLHWHSD 118

Query: 117 IIRQKCLKKLYQPLESHFLNQANILVATSPQYAHTSENLLRHKNKVKIIPLAVDENTYPI 176
           I++QK L KLY PL++  L +A ++V T+P Y   S  L   + KV  +P+ +DE   P+
Sbjct: 119 ILKQKMLLKLYSPLQNWLLRRAKVIVGTTPVYVQESPFLENIQRKVISVPIGIDE-MKPV 177

Query: 177 PSNDNINKWREK-VGEGFFLFVGVLRYYKGLDFLLEAA-KIN-QLPVIIAGDGPERVKLE 233
           P    + + +E+  G+     +G L  YKG ++L++A+ K+N    ++I G GP +  L+
Sbjct: 178 PG--RVAQIKERYAGKKIIFSLGRLVEYKGYEYLIKASQKLNDDYIILIGGKGPLQEYLQ 235

Query: 234 SYIAKHNL-ENVKLVGFISEEDKVILHLLSKAFVFPSHLRSEAFGISLIEAQMYCKAIIS 292
           S I +  + + VKL+GFI ++D          F   S  ++EAFGI  IEA    K +I+
Sbjct: 236 SLIDELGVRKKVKLLGFIDDKDLPDYFGACDLFCLSSIWKTEAFGIVQIEAMSCGKPVIA 295

Query: 293 SDI-GTGSSYVNINGETGLVVPPADSQSFSDAMLKIEHDTKLCEKLGINARKRFEQEFTA 351
            +I  +G S+VNIN  +G+ V P D+ + ++A+  +  D  L E+L   AR+R+E  FT 
Sbjct: 296 MNIPESGVSWVNINRFSGINVKPEDADALAEAITAVLTDECLYEELARGARRRYETMFTK 355

Query: 352 HRYAQSYTKLYS 363
               +    LYS
Sbjct: 356 ELMTELCLNLYS 367