Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 511 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Pseudomonas fluorescens FW300-N2E2

 Score =  134 bits (336), Expect = 9e-36
 Identities = 122/480 (25%), Positives = 222/480 (46%), Gaps = 45/480 (9%)

Query: 28  SYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNSYSFILLYFSIHYVGAKFVN------- 80
           S+ ++     + AA L S+GV  ED V + S NS  +I+ Y++I  +GA  VN       
Sbjct: 30  SFLDIDVQSSRLAASLESMGVKREDVVSIYSPNSPEWIITYYAILKIGA-IVNPLNTMLT 88

Query: 81  -------------VAPDSDVSYVSFIEDKVNPK----------LFIEKSQDFIRNIDSYT 117
                        VA  S    +  +++ + P           + +   + F   +D+  
Sbjct: 89  AREAAFAIKNCGAVAVFSTSDKLLALQEHIGPTEVISLISFDGITVAGMRHFNLLVDANV 148

Query: 118 FDNIFPP---QARGIADIMFTSGTTGEPKGVLLSHKSLVLATEHIISHVKNTNEDVELLL 174
               +P    Q   I+ I +TSGTTG+PKG +LSH+ ++       +    T  D+ +  
Sbjct: 149 AVREYPVTGIQKDDISTIGYTSGTTGQPKGAVLSHRCILTNVSMTATMHLRTASDIAVSA 208

Query: 175 MPLSHSFAMARMRTSLFAGGAIVVGCSFKQLKSVFKAIEFYKVTGLGLVPSAWSYITLMT 234
           +PLSH +    M +++  G  +V+  +F   +++  +I+ Y  T L  VP+ + Y+ L  
Sbjct: 209 LPLSHVYGNVVMNSAIAYGMTLVLHKTF-DAEAILSSIQIYGATLLEGVPTMYIYL-LNC 266

Query: 235 KDLIRKYSEQLNFIEFGSAHFPFEDKKQVAEWFPNTNVVMHYGLTEVS--RATFIDFHND 292
            +L       L     G    P+   + V E      ++  +G+TE+     T   +   
Sbjct: 267 PNLGAYDVSSLTRCTVGGQMMPYTAMENV-ERALGCRLLELWGMTELGGLGTTHSLYGER 325

Query: 293 DINAVGHRYRGADFKI--IDNKGAEVIEGEEGEIVFKAPWMLDGYFENSQLTSDCFV-EG 349
            + ++G      + +I  ++  G  +  GE GE+  + P ++  Y      T++    EG
Sbjct: 326 RLGSIGVALPHLEARIAQLELDGDALPLGEIGELQIRGPVVMKHYLGRPDATAETKTDEG 385

Query: 350 YFKTGDLGRVVGD-YLFLTGRLKEIINVGGKKVSPDQVEKVLSEALGVQECACAALSDAN 408
           + +TGDL R+  + ++++  RLK++    G  + P ++E+V++E   V   A  ++ D  
Sbjct: 386 WLRTGDLARMDSEGFIYIVDRLKDMFITAGFNIYPAELERVIAEHPSVAMVAVGSVLDEI 445

Query: 409 MGEVVQAYIVVKSGWDCENVISNIKETINGQLPMHMRPKKYSIVSALPKTVSGKVQRYKL 468
            GE+ +AYIV K+G++ +  I  I+     +L  +  P+ + IV  LPKT SGKV R  L
Sbjct: 446 KGELAKAYIVPKTGYEID--IQQIERHCRDRLAAYKVPRLFQIVEDLPKTSSGKVMRRML 503