Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II from Pseudomonas stutzeri RCH2

 Score =  132 bits (331), Expect = 4e-35
 Identities = 113/490 (23%), Positives = 208/490 (42%), Gaps = 48/490 (9%)

Query: 15  PDCIAVYENDRTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNSYSFILLYFSIHYV 74
           P+ IA+   +R  S++ L     + A  L++LG++  D V     NS ++++L+ +    
Sbjct: 28  PEQIALQYRERRWSFQALDRAANRVANHLLALGLSKADRVAAYGKNSDAYLILWLACTRA 87

Query: 75  GAKFVNVAPDSDVSYVSFIEDKVNPK-LFIEKS--------------------------- 106
           G   V V        ++++ D+   + LF++ S                           
Sbjct: 88  GLIHVPVNYSLTEHELAYVLDQSGARALFVDDSLKGLVDRIPAQRQLAIRGSLHSNETTS 147

Query: 107 --QDFIRNIDSYTFDNIFPPQA----RGIADIMFTSGTTGEPKGVLLSHKSLVLATEHII 160
              D +R       D   PP+       +  I++TSGTT +PKG + SH+SL+      +
Sbjct: 148 DRSDILRIATGSACD--LPPEVDIAETDVVQILYTSGTTSDPKGAMHSHRSLMTEYSSCL 205

Query: 161 SHVKNTNEDVELLLMPLSHSFAMARMRTSLFAGGAIVVGCSFKQLKSVFKAIEFYKVTGL 220
            H+     D  L  +PL HS  M          GA          + + + ++  ++   
Sbjct: 206 LHLDIKASDRCLAALPLYHSAQMHVFTMPALLAGAFSCLTDTPTPEEILRLLKTEQLNSF 265

Query: 221 GLVPSAWSYITLMTKDLIRKYSEQLNFIEFGSAHFPFEDKKQVAEWFPNTNVVMHYGLTE 280
              P+ W  + L  +  +      +  + +G++  P    +++    P + +   YG +E
Sbjct: 266 FAPPTVWIAL-LRHEQFVEAQLRHVQKLYYGASIMPEPIARELGARLPQSGLYNCYGQSE 324

Query: 281 VSRATFI---DFHNDDINAVGHRYRGADFKIID-NKGAEVIEGEEGEIVFKAPWMLDGYF 336
           ++    +   + H +   + G        +IID + G E   G  GE+V ++P ++ GY+
Sbjct: 325 IAPLATVLTPEEHRERPTSCGRPVSNVLTRIIDPSTGEECAPGVAGELVHRSPQLMVGYW 384

Query: 337 ENSQLTSDCFVEGYFKTGDLG-RVVGDYLFLTGRLKEIINVGGKKVSPDQVEKVLSEALG 395
           E    T++ F +G+F +GDLG R    Y+++  R+K+I+N GG  V+   VE+ L     
Sbjct: 385 EKPAETAEAFADGWFHSGDLGYRDAQGYIWIVDRIKDIVNTGGVLVASRDVEEALYRHPH 444

Query: 396 VQECACAALSDANMGEVVQAYIVVKSG--WDCENVISNIKETINGQLPMHMRPKKYSIVS 453
           V E A   + D    E + A +V+K     D + ++ + +      L     PK    V 
Sbjct: 445 VAEVAVIGVPDQKWIEAIAAVVVLKQNATLDAQALLHHAR----AHLAPFKVPKHVHFVE 500

Query: 454 ALPKTVSGKV 463
            LPK  SGK+
Sbjct: 501 QLPKNSSGKL 510