Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 563 a.a., AMP-dependent synthetase and ligase from Pseudomonas syringae pv. syringae B728a

 Score =  115 bits (288), Expect = 4e-30
 Identities = 98/363 (26%), Positives = 172/363 (47%), Gaps = 27/363 (7%)

Query: 124 PQARGIADIMFTSGTTGEPKGVLLSHKSLV---LATEHIISHVKNTNEDVELLL--MPLS 178
           P +  +A + +T GTTG  KG +L+H++L+   L    +++   N +E  E+++  +PL 
Sbjct: 204 PGSVDVAVLQYTGGTTGVAKGAMLTHRNLIANMLQCRALMA--SNLDEGCEIIITPLPLY 261

Query: 179 HSFAMA-RMRTSLFAGGAIVVGCSFKQLKSVFKAIEFYKVTGLGLVPSAWSYITLMTKDL 237
           H +A        +  G   ++  + + L ++ K +  +K +G   V     ++ L   D 
Sbjct: 262 HIYAFTFHCMAMMLLGNHNILISNPRDLPAMVKELSKWKFSGF--VGLNTLFVALCNSDG 319

Query: 238 IRK--YSEQLNFIEFGSA--HFPFEDKKQVAEWFPNTNVVMHYGLTEVSR-ATFIDFHND 292
            R   +S     +  G A      E  KQV        V   YG+TE S  AT       
Sbjct: 320 FRNLDFSALKVTLSGGMALQQAAAERWKQVT----GCQVCEGYGMTETSPVATVNPSQYV 375

Query: 293 DINAVGHRYRGADFKIIDNKGAEVIEGEEGEIVFKAPWMLDGYFENSQLTSDCF-VEGYF 351
            + ++G        K+ID+ G E+  GE GE+  K P ++ GY++  + T +    EG+ 
Sbjct: 376 QMGSIGIPVPSTLCKVIDDAGNELAFGETGELCIKGPQVMKGYWQRQEATDEMIDSEGWL 435

Query: 352 KTGDLGRVVGD-YLFLTGRLKEIINVGGKKVSPDQVEKVLSEALGVQECACAALSDANMG 410
           KTGD+  +  D Y+ +  R K++I + G  V P+++E VL+   GV +CA   + D   G
Sbjct: 436 KTGDIAIIQPDGYIRIVDRKKDMILISGFNVYPNELEDVLATLPGVLQCAAIGVPDEKSG 495

Query: 411 EVVQAYIVVKSGWDC--ENVISNIKETINGQLPMHMRPKKYSIVSALPKTVSGKVQRYKL 468
           E ++ ++V K G     E V+++++  + G    +  P+       LP T  GK+ R +L
Sbjct: 496 ETIKVFVVAKPGVTLTKEQVMAHMRANLTG----YKVPRSVEFRDVLPTTNVGKILRREL 551

Query: 469 SSE 471
             E
Sbjct: 552 RDE 554