Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., long-chain-fatty-acid--CoA ligase (RefSeq) from Shewanella amazonensis SB2B

 Score =  124 bits (310), Expect = 1e-32
 Identities = 111/461 (24%), Positives = 203/461 (44%), Gaps = 43/461 (9%)

Query: 43  LVSLGVTSEDAVLVRSNNSYSFILLYFSIHYVGAKFVNVAPDS----------------- 85
           + + GV     VLV +N  Y+   L       GAK + V  D                  
Sbjct: 81  IAAYGVLKAGMVLVNTNPLYTERELIHQFKDSGAKVLVVLSDLLPTLAKVVAETPIELVI 140

Query: 86  DVSYVSFIEDKVNPKLFIEKSQDFIRNIDSYTFDNIFPPQARG--IADIMFTSGTTGEPK 143
               +  +  ++ PK  + K+ +F++ ++  + ++  P  A    +A + +T GTTG  K
Sbjct: 141 STHALDLVSPQIQPKTGL-KNIEFLKALNLGSQESWQPVAANHSTLAALQYTGGTTGLSK 199

Query: 144 GVLLSHKSLV---LATEHIISHVKNTNEDVELLLMPLSHSFA-MARMRTSLFAGGAIVVG 199
           G +LSH +L+   L     +++V    ED+ +  +P+ H +A +  +   +  G   V+ 
Sbjct: 200 GAMLSHGNLIANALQCRDRLANVITPGEDIFVAPLPIYHIYAFLVNLVLFVEQGACSVLI 259

Query: 200 CSFKQLKSVFKAIEFYKVTGLGLVPSAWSYITLMTKDLIRKYSEQLNFIEFGSAHFPFED 259
            + + + S+ K +  Y  TG         +  L T  +   + E+   ++F         
Sbjct: 260 PNPRDIPSLIKTLAKYPFTG---------FAGLNTLFVALCHQEEFRALDFSHLKLTISG 310

Query: 260 KKQVAE-----WFPNTNVVMH--YGLTEVSRATFIDFHNDD-INAVGHRYRGADFKIIDN 311
              + E     W   T   +   YGL+E S    ++    + +  +G      + +I+D 
Sbjct: 311 GTALTEAAAGLWQQTTGCTISEGYGLSETSPVITLNQPGAERLGTIGRPVLATEVQILDE 370

Query: 312 KGAEVIEGEEGEIVFKAPWMLDGYFENSQLTSDCFV-EGYFKTGDLGRVVGDYLF-LTGR 369
               V  G+ GE+  + P ++ GY++ +  T   F  +G+FKTGD+     D  + +  R
Sbjct: 371 DETPVPMGQAGELAVRGPQVMSGYWQQAGETERVFSKDGFFKTGDIAIAEPDGCYRIVDR 430

Query: 370 LKEIINVGGKKVSPDQVEKVLSEALGVQECACAALSDANMGEVVQAYIVVKSGWDCENVI 429
            K++I V G  V P++VE VL+    V ECA   ++D   GE V+A IV+K   + ++  
Sbjct: 431 KKDMIIVSGFNVYPNEVENVLASHPAVLECAVIGVADERSGEAVKAVIVLKPSVEADDAR 490

Query: 430 SNIKETINGQLPMHMRPKKYSIVSALPKTVSGKVQRYKLSS 470
           + I       L  + +P+    V++LPK+  GK+ R  L S
Sbjct: 491 AAITAHCQANLAGYKQPRHIEFVASLPKSTVGKILRRALRS 531