Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  121 bits (304), Expect = 5e-32
 Identities = 100/356 (28%), Positives = 162/356 (45%), Gaps = 17/356 (4%)

Query: 126 ARGIADIMFTSGTTGEPKGVLLSHKSLVLATEHIISHVKNTN--EDVELLLMPLSHSFAM 183
           A  +A + +T GTTG PKG +L+H ++      I+         E+  L ++P  H FAM
Sbjct: 203 ATAVAVLQYTGGTTGLPKGAMLTHANVTGNLTQILGWFPEARWGEEKMLAVLPFFHVFAM 262

Query: 184 ARMRTSLFAGGAIVVGCSFKQLKSVFKAIEFYKVTGLGLVPSAWSYITLMTKDLIRKYSE 243
                   A GA ++      L++V K I   K T    VP+ +S I       + K   
Sbjct: 263 TVAMNVALALGAELILLPRFDLETVLKTIARKKPTLFPGVPTIYSAII----GAVAKTPY 318

Query: 244 QLNFIEF---GSAHFPFEDKKQVAEWFPNTNVVMHYGLTEVSRATFIDFHNDDIN--AVG 298
            L+ + F   G A  P E K +  E      ++  YGL+E S     +  +  I   ++G
Sbjct: 319 DLSSLRFCLSGGAPLPIEVKTRFEE-LTGCTLIEGYGLSEASPVVCCNPLDGAIKPGSIG 377

Query: 299 HRYRGADFKI--IDNKGAEVIEGEEGEIVFKAPWMLDGYFENSQLTSDCFVEGYFKTGDL 356
               G   +I  + +    V  GE GEI  + P ++ GY+   Q T D F++G  +TGD+
Sbjct: 378 QPLPGTTVEIRSVLDPALIVPRGERGEICVRGPQVMAGYWRRPQDTEDTFIDGALRTGDI 437

Query: 357 GRVVGD-YLFLTGRLKEIINVGGKKVSPDQVEKVLSEALGVQECACAALSDANMGEVVQA 415
           G +  + Y+FL  R+K++I  GG  V P  +E+ L +   V E     L D   GE  +A
Sbjct: 438 GYIDDEGYVFLVDRIKDVILCGGYNVYPRIIEEALYQHEAVAEAVVIGLPDDYRGEAPKA 497

Query: 416 YIVVKSGWDCENVISNIKETINGQLPMHMRPKKYSIVSALPKTVSGKVQRYKLSSE 471
           ++ ++ G        ++K  +  Q+     PK   +   LP+T+ GK+ +  L  E
Sbjct: 498 FVRLRDGHSA--TPEDLKTYLATQISRIEMPKTIELRDDLPRTMVGKLSKKALVDE 551