Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., long-chain fatty acid--CoA ligase from Rhodopseudomonas palustris CGA009

 Score =  142 bits (359), Expect = 2e-38
 Identities = 129/472 (27%), Positives = 212/472 (44%), Gaps = 56/472 (11%)

Query: 14  RPDCIAVYENDRTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNSYSFILLYFSIHY 73
           R D +A+  ++R+ S+  +   + + A+    LGVT  + V + + N + +I  YF++ +
Sbjct: 14  RADDVALVTSERSFSHGEMLDRVARLASVFRRLGVTGGERVAILAANGHEYIECYFAVLW 73

Query: 74  VGAKFVNVAPDSDVSYVSFIEDK--------VNPKLFIEKS---QDFIRNIDS------- 115
            G   V +  +S  S    IE          V+ + F++ +    D  R I +       
Sbjct: 74  AGGVVVPI--NSRFSLAEMIEQVTDAEPIVLVSDRSFLDSALQLADACRGITAVVAAAPG 131

Query: 116 -------YTFDNIFPPQ------ARG---IADIMFTSGTTGEPKGVLLSHKSLVLATEHI 159
                  Y ++     +       RG   +A + +T GTTG  KGV+LSH++L +     
Sbjct: 132 AAGLPKLYDYEAALADEKPCADAGRGNDDLACLFYTGGTTGRAKGVMLSHRNLWVNAVVT 191

Query: 160 ISHVKNTNEDVELLLMPLSHSFAMARMRTSLFAGGAIVVGCSFKQLKSVFKAIEFYKVTG 219
                     V L   PL H  A AR+ T+   GG  VV   F   K V  AI  +KVT 
Sbjct: 192 SLSFGFDETTVALHAGPLFHLGAGARVYTTSIMGGRHVVIPRFAP-KDVLAAISHHKVTV 250

Query: 220 LGLVPSAWSYITLMTKDLIRKYSEQLNFIEFGSAHFPFEDKKQVAEWFPNTNVVMHYGLT 279
              VP+    I L   DL       L  I +G++  P    ++    FP+      YG+T
Sbjct: 251 ATFVPTMLGMI-LQLPDLDSYDLSSLKLITYGASPMPEAVLQECLRRFPSIRFGQSYGMT 309

Query: 280 EVSRATFIDFHNDDI-NAVGHRYRGA-------DFKIIDNKGAEVIEGEEGEIVFKAPWM 331
           E+S    I   +D + +A  HR R A       + +I+D +  ++  GE GE+V + P +
Sbjct: 310 ELSPVATILSPDDHLPSAPRHRLRSAGRPVVSAEVRIVDAEDRQLKPGEVGEVVVRGPMV 369

Query: 332 LDGYFENSQLTSDCFVEGYFKTGDLGRV-VGDYLFLTGRLKEIINVGGKKVSPDQVEKVL 390
           + GY++  +LT+     G+  TGD GR     YL+++ R+K++I  GG+ V   +VE  +
Sbjct: 370 MMGYWKQPELTAHVLRGGWMHTGDSGRFDTEGYLYISDRIKDMIITGGENVYSIEVENAI 429

Query: 391 SEALGVQECACAALSDANMGEVVQAYIVVKSGWD---------CENVISNIK 433
           +    V +CA   +  A  GE V A +V + G           C +VI++ K
Sbjct: 430 AAHPDVLQCAVIGVPHAKWGEAVHAVVVRRPGSSLTTDELITFCRSVIADYK 481