Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 502 a.a., AMP-binding protein from Rhodopseudomonas palustris CGA009

 Score =  130 bits (327), Expect = 1e-34
 Identities = 116/483 (24%), Positives = 203/483 (42%), Gaps = 42/483 (8%)

Query: 15  PDCIAVYENDRTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNSYSFILLYFSIHYV 74
           PD  A   +   +++ +  +  ++ A+ L+  GV + D V + S N    I L  ++  +
Sbjct: 20  PDRTAFMVDGVRLTHRDYLARAERLASGLLRDGVHTGDRVAILSQNCSEMIELIGAVALI 79

Query: 75  GAKFVNVAPDSDVSYVSFIEDKVNPKLFIEKS--QDFIRNI------------------- 113
           GA  + V    +   ++F+     P + +  +  +D +  +                   
Sbjct: 80  GAILLPVNYRLNADEIAFVLGDGAPSVVVAGTDYRDIVAGVLPSLGGVKKAYAIGDGSGP 139

Query: 114 ----DSYTFDNIFPPQARGIAD---IMFTSGTTGEPKGVLLSHKSLVLATEHIISHVKNT 166
                    D  F     G AD   I+ T+   G P+G L+S  +L++A   ++   + T
Sbjct: 140 FAPFKDLASDTPFSAPEFGAADGFVIIHTAAVGGRPRGALISQGNLLIAQSSLVDAWRLT 199

Query: 167 NEDVELLLMPLSHSFAMARMRTSLFAGGAIVVGCSFKQLKSVFKAIEFYKVTGLGLVPSA 226
             DV L ++PL H   +  M T   AGGA V+   F   ++  + IE +KVT +      
Sbjct: 200 EADVNLGMLPLFHVTGLGLMLTLQQAGGASVIAAKFDPAQAA-RDIEAHKVTVMA----- 253

Query: 227 WSYITLMTKDLIRKYSEQLNFIEFGSAHFPFEDKKQVAEWFPNTNVVMHYGLTEVSRATF 286
             +  ++   L +    QL  +   +     E  ++     PN      +G +E S  + 
Sbjct: 254 -EFAPMLGNILDQAAPAQLASLRAVTGLDTPETIERFEATCPNATFWATFGQSETSGLST 312

Query: 287 IDFHNDDINAVGHRYRGADFKIIDNKGAEVIEGEEGEIVFKAPWMLDGYFENSQLTSDCF 346
              + D   + G         ++D +   +  GE GEIV + P +  GY+ N+  T   F
Sbjct: 313 FAPYRDRPKSAGRPLFWRTVAVVDAEDRPLPPGEVGEIVLRGPTVFKGYWNNAAATQHAF 372

Query: 347 VEGYFKTGDLGRVVGD-YLFLTGRL--KEIINVGGKKVSPDQVEKVLSEALGVQECACAA 403
             G+  TGD+GR   D YLF  GR   KE+I  GG+ V P +VE  L +   + +     
Sbjct: 373 RNGWHHTGDMGRFDADGYLFYAGRAPEKELIKTGGENVYPAEVEGALKQHPAIADAVVIG 432

Query: 404 LSDANMGEVVQAYIVVKSGWDCENVISN-IKETINGQLPMHMRPKKYSIVSALPKTVSGK 462
           + D    E ++A  V K G   E++ ++ + E +   +  + +PK    V ALPK   G 
Sbjct: 433 VPDPQWSEAIKAVCVCKPG---ESIAADALAEFVASLIARYKKPKHVVFVEALPKDAKGA 489

Query: 463 VQR 465
           + R
Sbjct: 490 IDR 492