Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., AMP-binding protein from Rhodopseudomonas palustris CGA009

 Score =  136 bits (342), Expect = 2e-36
 Identities = 120/483 (24%), Positives = 215/483 (44%), Gaps = 48/483 (9%)

Query: 23  NDRTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNSYSFILLYFSIHYVGAKFVNVA 82
           +DR +SY  L   ++K A  L +LG+   D V +   N + F+ +  + + +G   V + 
Sbjct: 53  DDRALSYRELDLLVRKIAVSLAALGIGKGDRVALFLGNCWEFLAVTLACNRLGVLVVPIG 112

Query: 83  PDSDVSYVSFIEDKVNPKLFI-------------EKSQDFIRNIDSYTFDNIFP------ 123
                + + F+ +    K+ +             E  Q   R +   T +   P      
Sbjct: 113 IRQRRAELEFLLNNSGAKVVVFEAELTDEIPAAAEVPQLAHRFVAHGTAEGARPFEDLLA 172

Query: 124 --PQARGIAD--------IMFTSGTTGEPKGVLLSHKSLVLATEHIISHVKNTNEDVELL 173
             P    +A+        I++TSGTTG+PKG  L+H S++ ++       + T  D  L+
Sbjct: 173 AEPANAPLAEMHEDDTAVILYTSGTTGKPKGAELTHLSILHSSYAFARAHELTERDRGLV 232

Query: 174 LMPLSHSFAMARMRTSLFAGGAIVVGCSFKQLKSVFKAIEFY------KVTGLGLVPSAW 227
            +PLSH   +  +  +  A G  VV      ++  FK ++F       ++T   LVP+ +
Sbjct: 233 AVPLSHVTGLVGVSYATIAAGGCVV-----LMRQAFKTVDFLALAARERITYSILVPAIY 287

Query: 228 SYITLMTKDLIRKYSEQLNFIEFGSAHFPFEDKKQVAEWFPNTNVVMHYGLTEVSRATFI 287
           + + +M  +  +          FG A  P    + +A+  PN  +   YG TE +  T I
Sbjct: 288 T-LAVMHPEFDKHDLSAWRIGCFGGAPMPVPTIEMLAKRLPNLQLRNAYGATETTSPTTI 346

Query: 288 ---DFHNDDINAVGHRYRGADFKIIDNKGAEVIEGEEGEIVFKAPWMLDGYFENSQLTSD 344
               +  D +++VG     A  +++D    EV  GE GE++   P ++  Y++     + 
Sbjct: 347 MPQAYWRDHMDSVGQAVPYAHVRVLDADDNEVAPGEPGELLIAGPMVVPRYWQRPDANAK 406

Query: 345 CFVEGYFKTGDLGRVVGD-YLFLTGRLKEIINVGGKKVSPDQVEKVLSEALGVQECACAA 403
            FV GY+++GD+G +  D ++ +  R K++IN GG K+   +VE V+    GV E A   
Sbjct: 407 EFVNGYWRSGDIGSIDQDGFVRVFDRKKDMINRGGFKIFSAEVENVICGIDGVLETAIIG 466

Query: 404 LSDANMGEVVQAYIVVKSGWDCENVISNIKETINGQLPMHMRPKKYSIVS-ALPKTVSGK 462
             D  +GE V A +V   G        ++      ++  +  P+   I S  LP+  +GK
Sbjct: 467 TPDPVLGERVNAIVVTSEGASLSE--RDVAAYCAARMSDYKVPESIIIRSEPLPRNANGK 524

Query: 463 VQR 465
           +Q+
Sbjct: 525 IQK 527