Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 547 a.a., cyclohexanecarboxylate-CoA ligase from Rhodopseudomonas palustris CGA009

 Score =  112 bits (280), Expect = 3e-29
 Identities = 120/494 (24%), Positives = 212/494 (42%), Gaps = 59/494 (11%)

Query: 25  RTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNSYSFILLYFSIHYVGAKFVNVAPD 84
           R  SY  LA+   + A  L  LGV   D V ++  N + F +LY +   +GA    + P 
Sbjct: 54  RRFSYRELATLADRVAVGLNRLGVGRGDVVAMQLPNWWQFTVLYLACSRIGAVLNPLMPI 113

Query: 85  SDVSYVSFI------EDKVNPKLF-----------IEKSQDFIRNI------DSYTFDNI 121
                +SF+      +  V PK F           ++     +R I       +  FD +
Sbjct: 114 FRERELSFMLKHGDAKVLVVPKSFRGFDHEAMARSLQPDLPALRTIVVVDGGGADDFDTL 173

Query: 122 FP------------------PQARGIADIMFTSGTTGEPKGVLLSHKSLVLATEHIISHV 163
                               P    I  +++TSGTTGEPKGV+ S  +L+         +
Sbjct: 174 LTTPEWEKQPDAAAILQGSRPSPDDITQLIYTSGTTGEPKGVMHSANTLMANIVPYAQRL 233

Query: 164 KNTNEDVELLLMPLSH--SFAMARMRTSLFAGGAIVVGCSFKQLKSVFKAIEFYKVTGLG 221
                DV L+  P++H   F    M   +    A++     + +    KA E  +   + 
Sbjct: 234 ALRESDVILMASPMAHQTGFMYGLMMPIMLRASAVL-----QDIWEPTKAAELIRTERVT 288

Query: 222 LVPSAWSYITLMTKDLIRKYSEQLNFIE-FGSAHFPFEDK-KQVAEWFPNTNVVMHYGLT 279
              ++  ++T +T+ ++++  E +  ++ F  A  P      + A+      +V  +G+T
Sbjct: 289 FTMASTPFLTDLTR-VVKESGEPVPSLKTFLCAGAPIPGPLVEQAQAGLGAKIVSAWGMT 347

Query: 280 EVSRATFIDFHNDDINAV---GHRYRGADFKIIDNKGAEVIEGEEGEIVFKAPWMLDGYF 336
           E    T I   +DD  A    G    G + K+ID  G  +   + G +V ++     GY 
Sbjct: 348 ENGAVTLIKLDDDDKLASTTDGCPLPGVEVKVIDGDGKTLPPNQIGRLVVRSCSNFGGYL 407

Query: 337 ENSQLTSDCFVEGYFKTGDLGRVVGD-YLFLTGRLKEIINVGGKKVSPDQVEKVLSEALG 395
           +     +    +G+F TGDL  +  D Y+ ++GR K++I  GG+ +   +VE +L +   
Sbjct: 408 KRPH-WNGTDADGWFDTGDLAYMTADGYIRISGRSKDVIIRGGENIPVVEVEALLYKHPA 466

Query: 396 VQECACAALSDANMGEVVQAYIVVKSGWDCENVISNIKETINGQ-LPMHMRPKKYSIVSA 454
           V + A  A  D  +GE   A +V K+G   +   + + E +  Q L +   P++  +  A
Sbjct: 467 VAQVAIVAYPDERLGERACAVVVPKTGASID--FAAMVEFLKAQKLALQYIPERLVVRDA 524

Query: 455 LPKTVSGKVQRYKL 468
           +P T SGK+Q+++L
Sbjct: 525 MPATPSGKIQKFRL 538