Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., Probable fatty-acid-CoA ligase FadD5 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase) from Mycobacterium tuberculosis H37Rv

 Score =  155 bits (393), Expect = 2e-42
 Identities = 134/502 (26%), Positives = 229/502 (45%), Gaps = 42/502 (8%)

Query: 4   VERIFNHSESRPDCIAVYENDRTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNSYS 63
           V ++  H+  +PD  A+     T+++ +L   +   A  L   GV   D V++   N   
Sbjct: 29  VNQLERHAMMQPDAPALRFVGNTMTWADLRRRVAALAGALSGRGVGFGDRVMILMLNRTE 88

Query: 64  FILLYFSIHYVGAKFVN-----------VAPDSDVSYVSFIEDKVNPKLF----IEKSQD 108
           F+    + + +GA  V            V  +  V++V   E  + P       I+    
Sbjct: 89  FVESVLAANMIGAIAVPLNFRLTPTEIAVLVEDCVAHVMLTEAALAPVAIGVRNIQPLLS 148

Query: 109 FIRNIDSYTFDNIFP-----PQARGIAD-----------IMFTSGTTGEPKGVLLSHKSL 152
            I      + D++F       +A  + +           IM+TSGTTG PKG +L+H +L
Sbjct: 149 VIVVAGGSSQDSVFGYEDLLNEAGDVHEPVDIPNDSPALIMYTSGTTGRPKGAVLTHANL 208

Query: 153 V-LATEHIISHVKNTNEDVELLLMPLSHSFAMARMRTSLFAG-GAIVVGCSFKQLKSVFK 210
              A   + +   N N DV  + +PL H   +  M T L  G   ++          +  
Sbjct: 209 TGQAMTALYTSGANINSDVGFVGVPLFHIAGIGNMLTGLLLGLPTVIYPLGAFDPGQLLD 268

Query: 211 AIEFYKVTGLGLVPSAWSYITLMTKDLIRKYSEQLNFIEFGSAHFPFEDKKQVAEWFPNT 270
            +E  KVTG+ LVP+ W  +   T+   R    +L  + +G+A  P    +Q++  FP T
Sbjct: 269 VLEAEKVTGIFLVPAQWQAVC--TEQQARPRDLRLRVLSWGAAPAPDALLRQMSATFPET 326

Query: 271 NVVMHYGLTEVSRATFIDFHNDDI---NAVGHRYRGADFKIIDNKGAEVIEGEEGEIVFK 327
            ++  +G TE+S  T +    D I    +VG        +++D    +V  GE GEIV++
Sbjct: 327 QILAAFGQTEMSPVTCMLLGEDAIAKRGSVGRVIPTVAARVVDQNMNDVPVGEVGEIVYR 386

Query: 328 APWMLDGYFENSQLTSDCFVEGYFKTGDLGRVVGD-YLFLTGRLKEIINVGGKKVSPDQV 386
           AP ++  Y+ N + T++ F  G+F +GDL R+  D Y+++  R K++I  GG+ +   ++
Sbjct: 387 APTLMSCYWNNPEATAEAFAGGWFHSGDLVRMDSDGYVWVVDRKKDMIISGGENIYCAEL 446

Query: 387 EKVLSEALGVQECACAALSDANMGEVVQAYIVVKSGWDCENVISNIKETINGQLPMHMRP 446
           E VL+    + E A    +D   GEV  A   V +    +  I ++ E +  +L  +  P
Sbjct: 447 ENVLASHPDIAEVAVIGRADEKWGEVPIAVAAVTND---DLRIEDLGEFLTDRLARYKHP 503

Query: 447 KKYSIVSALPKTVSGKVQRYKL 468
           K   IV ALP+  +GKV + +L
Sbjct: 504 KALEIVDALPRNPAGKVLKTEL 525