Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 550 a.a., AMP-binding domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  126 bits (316), Expect = 2e-33
 Identities = 98/350 (28%), Positives = 178/350 (50%), Gaps = 16/350 (4%)

Query: 129 IADIMFTSGTTGEPKGVLLSHKSLVLATEHIISHVKNTNEDVELLLMPLSHSFA-MARMR 187
           + ++ +TSGTTG PKGV+L+H ++      I  +   T +D   L +PL H F  +  + 
Sbjct: 194 VVNMQYTSGTTGFPKGVMLTHVNIGNNGYWIGKNQHFTEKDRVCLPVPLFHCFGCVLGVL 253

Query: 188 TSLFAGGAIVVGCSFKQLKSVFKAIEFYKVTGLGLVPSAWSYITLMTKDLIRKY--SEQL 245
            ++  G A+V+  SF  +  V  +++  K T L  VP+   ++ ++   L  ++  S   
Sbjct: 254 AAINHGAALVILESFSPMH-VMASVDQEKCTALYGVPTM--FLAVLEHKLFERFDFSSLR 310

Query: 246 NFIEFGSAHFPFEDKKQVAEWFPNTNVVMHYGLTE----VSRATFIDFHNDDINAVGHRY 301
             I  GS   P    ++V E      + + YGLTE    ++++   D     +  VG   
Sbjct: 311 TGIMAGSV-CPEPLMRRVVEKMYMREITICYGLTEGSPVMTQSLVTDPFERRVQTVGRAM 369

Query: 302 RGADFKIID-NKGAEVIEGEEGEIVFKAPWMLDGYFENSQLTSDCF-VEGYFKTGDLGRV 359
              + +I+D +   EV  G +GE+V +   ++ GY+   + T+     +G+  +GDLG +
Sbjct: 370 PCIEVRIVDPDTNEEVPRGTQGEVVCRGYNVMKGYYNMPEATTAAIDADGWLHSGDLGVM 429

Query: 360 VGD-YLFLTGRLKEIINVGGKKVSPDQVEKVLSEALGVQECACAALSDANMGEVVQAYIV 418
             + Y+ +TGR+K++I  GG+ + P ++E+ L    GVQ+     ++    GE V A+I+
Sbjct: 430 DEEGYVVITGRIKDMIIRGGENIYPREIEEFLYGMDGVQDVQVVGVNSRKYGEEVGAFII 489

Query: 419 VKSGWDCENVISNIKETINGQLPMHMRPKKYSIVSALPKTVSGKVQRYKL 468
            K G   E    ++++   G++  H  P+  S + A P T SGK+Q++KL
Sbjct: 490 PKPG--VEMAPEDVRDYCRGRIAWHKVPRYISFIDAYPMTASGKIQKFKL 537