Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 583 a.a., AMP-dependent synthetase and ligase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  119 bits (297), Expect = 4e-31
 Identities = 98/353 (27%), Positives = 170/353 (48%), Gaps = 17/353 (4%)

Query: 129 IADIMFTSGTTGEPKGVLLSHKSLVLATEHIISHVKNTNE--DVELLLMPLSHSFAMARM 186
           +A + +T GTTG  KGV+L+H ++ +  + I + + +  +     L LMP  H + +   
Sbjct: 213 LAVLQYTGGTTGISKGVMLTHHNMSVNVQQITTILGDARDMDHCFLGLMPYFHVYGLTTC 272

Query: 187 RTSLFAGGAIVVGCSFKQLKSVFKAIEFYKVTGLGLVPSAWSYITLMTKDLIRKYS-EQL 245
            T   A  A +V       + V   I+ +K T     PS   YI+LM +  +  Y    +
Sbjct: 273 LTLPTALAATIVPFPRYVPRDVLVGIQKHKPTIFPGAPSI--YISLMQQKEVGDYDLTSI 330

Query: 246 NFIEFGSAHFPFEDKKQVAEWFPNTNVVMHYGLTEVSRATFID-FHN-DDINAVGHRYRG 303
            +   GSA  P E  K+  E      V+  +GLTE S  T ++  H      ++G  +  
Sbjct: 331 RYCISGSAPMPVEHIKRFRE-LTGAQVIEGFGLTEASPVTHLNPIHGVSKTGSIGIPFPD 389

Query: 304 ADFKIIDNKGAEVI--EGEEGEIVFKAPWMLDGYFENSQLTSDCFVEGYFKTGDLGRVVG 361
            + +I+D +  +V    G+ GE++ + P ++ GY+     T++    G+  TGD+  +  
Sbjct: 390 TEARIVDMEVGQVPLPAGKVGELIIRGPQVMKGYWNRPDETANTLRNGWLYTGDIAIMDE 449

Query: 362 D-YLFLTGRLKEIINVGGKKVSPDQVEKVLSEALGVQECACAALSDANMGEVVQAYIVVK 420
           D Y  +  R K++  VGG  V P ++++VL E   ++E     +     GE+++A++VVK
Sbjct: 450 DGYFTIVDRKKDMFLVGGYNVYPREIDEVLHEHPKIKEAVTVGVPHPTRGEMIKAFVVVK 509

Query: 421 SGWDC--ENVISNIKETINGQLPMHMRPKKYSIVSALPKTVSGKVQRYKLSSE 471
            G       V+++ +E    +L  +  PK+      LPKTV GKV R  L +E
Sbjct: 510 PGEKLTKAEVVAHCRE----KLASYKVPKQVEFRDDLPKTVVGKVLRRILRTE 558