Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  125 bits (314), Expect = 4e-33
 Identities = 93/349 (26%), Positives = 168/349 (48%), Gaps = 12/349 (3%)

Query: 129 IADIMFTSGTTGEPKGVLLSHKSLVLATEHIISHVKNTNEDVELLLMPLSHSFAMARMRT 188
           + ++ +TSGTTG PKGV+L+HK+++    +I    K T E+   L +PL H F +     
Sbjct: 191 VINMQYTSGTTGFPKGVMLTHKNILNNGYYIGEKQKFTEEERLCLPVPLFHCFGIVLGVL 250

Query: 189 SLFAGGAIVVGCSFKQLKSVFKAIEFYKVTGLGLVPSAWSYITLMTKDLIRKYS-EQLNF 247
           +L   G  +V         V  AI+  K T +  VP+   +I   +  +   +    L  
Sbjct: 251 ALLTHGGTLVMLEIFDPLLVLAAIQKEKCTAVYGVPT--MFIAEFSHPMFEMFDLSSLRT 308

Query: 248 IEFGSAHFPFEDKKQVAEWFPNTNVVMHYGLTEVSRATFIDFHNDD----INAVGHRYRG 303
                +  P E  K+V        + + YGLTE S    +   +D     + +VG     
Sbjct: 309 GIMAGSTCPIEAMKKVMSDMYMREITISYGLTEASPVFTMTSVDDPFEKRVESVGKAMPH 368

Query: 304 ADFKIIDNKGAEVI-EGEEGEIVFKAPWMLDGYFENSQLTSDCF-VEGYFKTGDLGRVVG 361
            + KIID +  E +  G  GEI  +   ++ GY++  + T++    +G+  +GDL     
Sbjct: 369 CEVKIIDPETGETLAPGNVGEICCRGYNVMKGYYKMPEKTAEVIEKDGWLHSGDLAVEDE 428

Query: 362 D-YLFLTGRLKEIINVGGKKVSPDQVEKVLSEALGVQECACAALSDANMGEVVQAYIVVK 420
           D Y  + GR+K++I  GG+ + P ++E+ L    G+ +     + D   GE+V A+++ K
Sbjct: 429 DGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDEKYGEIVGAFVIPK 488

Query: 421 SGWDCENVISNIKETINGQLPMHMRPKKYSIVSALPKTVSGKVQRYKLS 469
            G++ +    ++++    ++  +  PK   +V   P T SGK+Q++KL+
Sbjct: 489 EGYEIKE--EDVRDFALEKIARYKVPKHVFVVEEFPMTASGKIQKFKLT 535