Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., long-chain-fatty-acid--CoA ligase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  129 bits (323), Expect = 3e-34
 Identities = 97/358 (27%), Positives = 171/358 (47%), Gaps = 12/358 (3%)

Query: 122 FPPQARGIADIMFTSGTTGEPKGVLLSHKSLVLATEHI---ISHVKNTNEDVELLLMPLS 178
           F P    +A + +T GTTG  KG +L+H +++     +   I  V +  ED+ +  +P+ 
Sbjct: 178 FVPTLSDLAALQYTGGTTGLSKGAMLTHGNMLANAAQVKSRIGSVISEGEDIFVAPLPIY 237

Query: 179 HSFA-MARMRTSLFAGGAIVVGCSFKQLKSVFKAIEFYKVTGLGLVPSAWSYITLMTKDL 237
           H +A M  +      GG  V+  + + +  + K +  Y  TG   + + +  +    +  
Sbjct: 238 HIYAFMVNLVLYFECGGCSVLIPNPRDINGLIKTLAKYPFTGFAGLNTLFVALCHQPEFK 297

Query: 238 IRKYSEQLNFIEFGSAHFPFEDKKQVAEWFPNTNVVMHYGLTEVSRATFIDFHN-DDINA 296
              +S     I  G+A         + +      +   YGL+E S    ++      I  
Sbjct: 298 ALNFSHLKITISGGTALTAAA--ANLWQQTTGNTISEGYGLSETSPVISLNAPGYQKIGT 355

Query: 297 VGHRYRGADFKIIDNKGAEVIEGEEGEIVFKAPWMLDGYFENSQLTSDCFV-EGYFKTGD 355
           +G    G + K++D  G EV +G  GE+  + P ++ GY+ N Q T++    +G+FKTGD
Sbjct: 356 IGKPVLGTEVKLLDESGNEVTQGTAGELAARGPQVMLGYWNNPQETANVMTPDGFFKTGD 415

Query: 356 LGRVVGDYLF--LTGRLKEIINVGGKKVSPDQVEKVLSEALGVQECACAALSDANMGEVV 413
           +  ++ +  F  +  R K++I V G  V P++VE VL+    + ECA   + D + GE V
Sbjct: 416 IA-ILNEEGFHQIVDRKKDMIIVSGFNVYPNEVENVLASHPNIIECAVVGVKDDHSGEAV 474

Query: 414 QAYIVVK-SGWDCENVISNIKETINGQLPMHMRPKKYSIVSALPKTVSGKVQRYKLSS 470
           +A+IV+K    D E + + I      QL  +  PK+   +S LPK+  GK+ R +L +
Sbjct: 475 KAFIVLKDDSQDHEKIKTAILNFCREQLTAYKLPKQIEFMSQLPKSTVGKILRRELKN 532