Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 513 a.a., AMP-dependent synthetase and ligase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  115 bits (289), Expect = 3e-30
 Identities = 107/361 (29%), Positives = 170/361 (47%), Gaps = 20/361 (5%)

Query: 124 PQARGIADIMFTSGTTGEPKGVLLSHKSLVLATEHIISHVKNTNEDVELLLMPLSHSFAM 183
           P+A  +A I+ TSGTT  PK V L   ++  +  +I + +  T  D  + +MPL H   +
Sbjct: 152 PEAGDVALILHTSGTTSRPKIVPLLQSNVAASAANIRASLDLTAADRCMNVMPLFHIHGL 211

Query: 184 -ARMRTSLFAGGAIVVGCSFKQLKSVFKAIEFYKVTGLGLVPSAWSYITLMT---KDLIR 239
            A +  SL AG +I     F  L + F  ++  K +    VP+    I        ++I 
Sbjct: 212 IAAVSASLEAGASIWCTPGFNAL-AFFGQLDDCKPSWYTAVPTMHQAILTRAGRNAEIIA 270

Query: 240 KYSEQLNFIEFGSAHFPFEDKKQVAEWFPNTNVVMHYGLTEVSR---ATFIDFHNDDINA 296
           + +  L F+   SA  P     ++ + F    V+  YG+TE +    +  + F      +
Sbjct: 271 RAN--LRFLRSSSASLPPPVMAELEKTF-GAPVIEGYGMTEAAHQMCSNPLGFDTQKPGS 327

Query: 297 VGHRYRGADFKIIDNKGAEVIEGEE-GEIVFKAPWMLDGYFENSQLTSDCFVEG----YF 351
           VG    G   +I       +I+  E GE+V   P +  GY  N +  +  F E     +F
Sbjct: 328 VGVP-AGPQVRIAHEAEDRLIDSSEIGEVVISGPNVTPGYEGNPEANAKSFFEAEGARWF 386

Query: 352 KTGDLGRVVGD-YLFLTGRLKEIINVGGKKVSPDQVEKVLSEALGVQECACAALSDANMG 410
           +TGD G    D YL LTGRLKEIIN GG+KVSP +V+ +L +   + +    AL    +G
Sbjct: 387 RTGDQGAFDADGYLSLTGRLKEIINRGGEKVSPLEVDAILLDHAEIAQVVTFALPHPKLG 446

Query: 411 EVVQAYIVVKSGWDCENVISNIKETINGQLPMHMRPKKYSIVSALPKTVSGKVQRYKLSS 470
           E V A +V+  G        +I++    +L     P+K  I+  LPK  +GK+QR  ++ 
Sbjct: 447 EEVAAAVVLTEGSTMTE--RDIRDFAASRLADFKVPRKVVILDELPKGATGKIQRIGMAE 504

Query: 471 E 471
           +
Sbjct: 505 K 505