Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., AMP-dependent synthetase and ligase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  125 bits (313), Expect = 4e-33
 Identities = 101/352 (28%), Positives = 171/352 (48%), Gaps = 16/352 (4%)

Query: 126 ARGIADIMFTSGTTGEPKGVLLSHKSLVLATEHIISHVKNTNEDVELLLMPLSHSFAMAR 185
           AR I  + ++SGTTG PKGV+LSH++LV+  +     +  T +DV +  +P  H + M  
Sbjct: 169 ARDIVVLPYSSGTTGLPKGVMLSHRNLVVNVDQTAEIIGITVQDVTVGFLPFFHIYGMTV 228

Query: 186 MRTSLFAGGAIVVGCSFKQLKSVFKAIEFYKVTGLGLVPSAWSYITLMTKDLIRKYS-EQ 244
           +     + GA VV      L+      + ++   L + P     + L    ++  Y    
Sbjct: 229 LMNCYLSRGAAVVTMPRFDLEQFLSLCQTHRPRQLYIAPPV--ALALAKHPMVDDYDLSG 286

Query: 245 LNFIEFGSAHFPFEDKKQVAEWFPNTNVVMHYGLTEVSRATFIDFHNDDI-NAVGHRYRG 303
           + FI  G+A    +  + V        +V  YG+TE+S  +       ++  +VG     
Sbjct: 287 VEFILSGAAPLGGDVAEAVGRRL-GVEMVQGYGMTEMSPVSHFTPPGQNVPGSVGPTAPS 345

Query: 304 ADFKIIDNKGAEVIEGEEGEIVFKAPWMLDGYFENSQLTSDCFV-EGYFKTGDLGRV-VG 361
           A+ +I+D +  E  +  EGE+  + P ++ GY      T++    +G+ KTGDLGR    
Sbjct: 346 AESRIVDPETGE--DAAEGEVWVRGPQIMQGYLNRPDATAETVTRDGWLKTGDLGRFDEA 403

Query: 362 DYLFLTGRLKEIINVGGKKVSPDQVEKVLSEALGVQECACAALSDANMGEVVQAYIVVKS 421
             LF+T R+KE+I V G +V+P ++E VL     + + A   + D + GE   A+ VV+S
Sbjct: 404 GNLFITDRVKELIKVSGFQVAPAELEAVLLTHPAITDAAVIGVPDDSAGERPMAF-VVRS 462

Query: 422 GWDCEN--VISNIKETINGQLPMHMRPKKYSIVSALPKTVSGKVQRYKLSSE 471
             D     VI++  E     L  + R  + + V A+PK+ SGK+ R  L ++
Sbjct: 463 DPDLSEGAVIAHAAE----HLAHYKRIARVAFVEAVPKSASGKILRRLLRAK 510