Pairwise Alignments

Query, 271 a.a., sugar ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., LPS O-antigen ABC transporter ATP-binding protein from Klebsiella michiganensis M5al

 Score =  148 bits (373), Expect = 1e-40
 Identities = 77/244 (31%), Positives = 136/244 (55%), Gaps = 6/244 (2%)

Query: 22  MIELSNVNLHYPVPGHFSHSLQTTISSKIGGVLGSSSAKDKEMKYVHALRDINLKLEDSS 81
           +I+ +NV   YP+  H    ++  I          +    K  KY+ A++D++  +    
Sbjct: 4   VIDFNNVTKEYPLYHHIGSGIKDLIFHP-----KRAFQLLKGRKYL-AIQDVSFTVGKGE 57

Query: 82  RLGIIGHNGAGKTTLLRLLSQVYPPTSGKVTIEGKISALTDFTLGMDPNATGLKNIEFRL 141
            + +IG NGAGK+T L L++ V  PT G VT  G+++++ +   G  P  TG +NI    
Sbjct: 58  AVALIGRNGAGKSTSLGLVAGVIKPTKGSVTTRGRVASMLELGGGFHPELTGRENIYLNA 117

Query: 142 VFMGCTFKEAQQAVEEIVAFSELGEFINLPVRTYSTGMFLRLAFAISTHFTPDILILDEV 201
             +G   KE QQ ++ I+ FSELGEFI+ P+R YS+GM  +L F++ +   PDILI+DEV
Sbjct: 118 TLLGLRRKEVQQRMDRIIEFSELGEFIDEPIRVYSSGMLAKLGFSVISQVEPDILIIDEV 177

Query: 202 IGAGDETFREKALSRLESLIKKSRMVVLSSHDLNAIKQYCDQAIVMEKGEIVFNGTPQSC 261
           +  GD +F+ K +  ++    +   ++  SH+++ +++ CD+ + +E   +   G+ +  
Sbjct: 178 LAVGDISFQAKCIKTIKEFKNRGVTILFVSHNMSDVEKICDRVVWIENHRLREIGSAERI 237

Query: 262 IDYY 265
           I+ Y
Sbjct: 238 IELY 241