Pairwise Alignments

Query, 264 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., sugar ABC transporter permease from Azospirillum brasilense Sp245

 Score =  119 bits (298), Expect = 7e-32
 Identities = 75/264 (28%), Positives = 136/264 (51%), Gaps = 21/264 (7%)

Query: 11  DIVSVFYNWRIVHLLGVSTLRSRYSRSKFGQTWLSITMFVQILCIGLIWSLIWRMGVDDY 70
           D+      W +   LG   +R RY RS  G  WL+++M V +  +GL++  ++++ + +Y
Sbjct: 19  DLAEGLKRWTLWSTLGWHDIRKRYRRSVLGPFWLTLSMAVLVGSLGLVYGTLFQLDLQNY 78

Query: 71  LPYVGVGHIIYLFYTQTINESTGIFVADARVYLNDRQPFMLSVGAHIYRNVLILLHNIPT 130
           LP++ +    +      +NE    FV    +  N R P  + V   ++RN++I  HNI  
Sbjct: 79  LPFLSISLATWTLIAAILNEGCMSFVELEALIKNVRIPMSVHVLRILWRNLIIYAHNI-V 137

Query: 131 IFLLV-----IWSSSANFEFSFMFVISLSLSLFFVLFASYFCAVISTRFRDLIQLIGLLM 185
           IF +V     IW  +     +F  +  L+++  +++       +I TRFRD+  +I  ++
Sbjct: 138 IFAVVAAIFGIWPGAVGL-LAFFGIGLLAVNALWIML---LFGMICTRFRDVPLIIASVI 193

Query: 186 QLAFFVSPVMWKVSFLPEQYQNYVYINPFASLLELIRNPIIGIDVNPLAFV-----SLVA 240
           QL FFV+PVMWK   + E+ +  V +NP   ++ELIR P++G   +  ++V     +L  
Sbjct: 194 QLLFFVTPVMWKPELMGER-RGLVVLNPLYHIIELIRAPLLGSAPSWTSWVVVILLALAG 252

Query: 241 WTFIIGMVSYFSYKVLDKKVIFWV 264
           WTF     ++  Y    K++ +W+
Sbjct: 253 WTF-----TFLCYARFRKRIAYWL 271