Pairwise Alignments

Query, 264 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., ABC-2 from Pseudomonas syringae pv. syringae B728a

 Score = 60.8 bits (146), Expect = 3e-14
 Identities = 45/223 (20%), Positives = 107/223 (47%), Gaps = 19/223 (8%)

Query: 32  SRYSRSKFGQTWLSITMFVQILCIGLIWSLIWRM---GVDD---YLPYVGVGHIIYLFYT 85
           +R+SRS+ G  W+ I    Q+    L+ S +      G+D+   Y  Y+  G + + +++
Sbjct: 25  ARFSRSRLGGLWMIINPLAQVAIYALVLSNVLAAKLPGIDNKYAYAVYLMAGMLAWSYFS 84

Query: 86  QTINESTGIFVADARVYLNDRQPFM----LSVGAHIYRNVLILLHNIPTIFLLVIWSSSA 141
           + I     +F+    +    R P +    +  G+ +   VL+    +     L  W    
Sbjct: 85  EIIGRCLTLFIDQGNLMKKMRFPRITLPVIVAGSCLLNYVLLFAAILLVFAALGQWP--- 141

Query: 142 NFEFSFMFVISLSLSLFFVLFA-SYFCAVISTRFRDLIQLIGLLMQLAFFVSPVMWKVSF 200
              +  +++I L++ +  +         V++   RD+ Q+I +L+Q+ F+ +P+++ ++ 
Sbjct: 142 --HWQMLWLIPLTIVITALAVGLGLILGVLNVFIRDVGQVIPILLQVWFWFTPIVYPLNI 199

Query: 201 LPEQYQNYVYINPFASLLELIRNPII---GIDVNPLAFVSLVA 240
           +PEQ+++ + INP   ++    + ++     D+  +A +++VA
Sbjct: 200 IPEQFKSVMGINPMFPIVSAYHDVLVYARAPDLQSMAVIAVVA 242