Pairwise Alignments

Query, 264 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., ABC transporter permease protein from Synechococcus elongatus PCC 7942

 Score = 45.4 bits (106), Expect = 1e-09
 Identities = 39/207 (18%), Positives = 90/207 (43%), Gaps = 13/207 (6%)

Query: 30  LRSRYSRSKFGQTWLSITMFVQILCIGLIWSLIWRM---------GVDDYLPYVGVGHII 80
           L ++Y  S  G  W  +    Q+L    I+S+I +              Y  ++  G + 
Sbjct: 34  LEAQYQGSVLGNAWPLLNQLSQLLIYTYIFSMILKTRPALASLGDSTMGYGLWLFSGLLP 93

Query: 81  YLFYTQTINESTGIFVADARVYLNDRQPFMLSVGAHIYRNVLILLHNIPTIFLLVIWS-S 139
           ++ +T   + +    +      L  +  F L +   +   V ++     T+ LL   + +
Sbjct: 94  WIAFTNGFSRAATAVIRQPN--LVKKVVFPLGLLPLVDPGVALVESAFGTLVLLAATAIA 151

Query: 140 SANFEFSFMFVISLSLSLFFVLFASYFCAVISTRFRDLIQLIGLLMQLAFFVSPVMWKVS 199
             N + +    +            +Y  A ++   RD+ Q++G+ + L F+++P+++ ++
Sbjct: 152 GVNLQGALWLPLLWLPQFLLTAGLAYLLAGLTVYLRDIPQIVGVSLNLWFYLTPIVYPLT 211

Query: 200 FLPEQYQNYVY-INPFASLLELIRNPI 225
            +PE  + ++  +NP A L+EL R+ +
Sbjct: 212 LIPEPLRGWLLTLNPMAQLVELYRSTL 238