Pairwise Alignments

Query, 264 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., ABC transporter from Burkholderia phytofirmans PsJN

 Score =  129 bits (323), Expect = 8e-35
 Identities = 70/261 (26%), Positives = 144/261 (55%), Gaps = 11/261 (4%)

Query: 9   LKDIVSVFYNWRIVHLLGVSTLRSRYSRSKFGQTWLSITMFVQILCIGLIWSLIWRMGVD 68
           +KD+ +    WR+  LLG   +R RY+RS+ G  WL+I+  V I  IGL++  ++   + 
Sbjct: 5   IKDLGASLIRWRLWMLLGWLEIRQRYARSRIGPFWLTISTSVMITSIGLVYGTLFGQKMG 64

Query: 69  DYLPYVGVGHIIYLFYTQTINESTGIFVADARVYLNDRQPFMLSVGAHIYRNVLILLHNI 128
           +YLP++ V  I +  ++Q + E +  +++ A        P  + +   ++RN++I  HN+
Sbjct: 65  EYLPFLAVSIIFWTMFSQIVTEGSLAYISSATYIRQISTPKTVFILQVVWRNIIIFGHNL 124

Query: 129 PTIFLLVIWSSSANFEFSFMFVISLSLSLFFVLFASYFCAVISTRFRDLIQLIGLLMQLA 188
             I +L+I     ++    +F+    L L    + +   A++S RFRDL Q+I  ++Q+A
Sbjct: 125 LIIVVLLIVFGVKSYTTLPLFLPGFVLFLLNAAWIAMVVALVSARFRDLPQIIAAMIQVA 184

Query: 189 FFVSPVMWKVSFLPEQYQNYVYINPFASLLELIRNPIIGIDVNPLAF-----VSLVAWTF 243
           F+V+P+++K   L  +++  V  NP   ++ L+R+P+ G+  + + +     +++V W+F
Sbjct: 185 FYVTPIIYKPGSL-TRFRWVVDYNPLTYMMSLVRDPLTGVFPSDITWAVGIALAIVGWSF 243

Query: 244 IIGMVSYFSYKVLDKKVIFWV 264
            + +   ++     K++ +WV
Sbjct: 244 ALFVTGRYA-----KRIPYWV 259