Pairwise Alignments

Query, 367 a.a., perosamine synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., polysaccharide biosynthesis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  158 bits (399), Expect = 3e-43
 Identities = 103/381 (27%), Positives = 190/381 (49%), Gaps = 25/381 (6%)

Query: 1   MIPVYEPSLDGNERKYLNDCIDSGWVSSRGKYIDRFETEFAEFLKVKHATTVSNGTVALH 60
           MIP     ++  +   + + ++S +++ +G  +  FE+  A +   ++   V++ T ALH
Sbjct: 1   MIPYGRQDINQADVDAVIEVLNSDYLT-QGPKVPAFESAVASYCSARYGVAVNSATSALH 59

Query: 61  LAMSALGITQGDEVIVPTFTYVASVNTIVQCGALPVFAEIEG-------ESLQVSVEDVK 113
           +A  ALG+   D V     T+VAS N  + CGA   F +++         +L + +E   
Sbjct: 60  IACLALGVGPNDIVWTSPITFVASANCALYCGAEIDFVDVDPLTGNLCPHALAMKLEQAA 119

Query: 114 RKINKKTKAVMAVHIYGQACDIQSLRDLCDEHGLYLIEDCAEAIGTAVNGKKVGT--FGD 171
           R I K  K V+ VH+ G +CD+ ++  L +++  ++IED +  IG + +G  +G+  + D
Sbjct: 120 R-IGKLPKVVIPVHLCGHSCDMAAIAALAEQYSFHIIEDASHGIGGSYHGYPLGSCQYSD 178

Query: 172 VSTFSFFGNKTITSGEGGMVVSNSDIIIDKCLRLKNQGVVAGKR-----------YWHDL 220
           ++ FSF   K ITS EGGM ++NS  + +K    ++ G+                Y    
Sbjct: 179 ITVFSFHPVKIITSAEGGMAMTNSSELAEKMALYRSHGITKAPDKMLRPDEGDWYYEQHA 238

Query: 221 VAYNYRMTNLCAAIGVAQLERVDKIIKRKRDIAEIYRSELAGLPMQVHKESNGTFHSYWL 280
           + +NYRMT L AA+G++Q+ R++  + ++ ++A IYR EL GLP    +  + T  +  L
Sbjct: 239 LGFNYRMTELQAALGLSQISRLNAFVLKRNELAAIYRKELIGLPFCWVEPLSNTQSARHL 298

Query: 281 TSIILDQEFEVHRDGLMTFLENNDIESRPFFYPAHTLPMYEHLAEKTA-FPLSNSYSHRG 339
             I L+      R  L   +   +++    ++P H  P Y     K   FP + ++  + 
Sbjct: 299 QIIRLND--ASRRKQLFNDMRAANVQVHVHYFPVHLQPYYLKQGFKEGDFPQAEAFYQQI 356

Query: 340 INLPSWPGLCDDQVKEICNCI 360
           + LP +P + D +   + N +
Sbjct: 357 LTLPLYPLMTDKEQACVINTL 377