Pairwise Alignments

Query, 367 a.a., perosamine synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 358 a.a., polysaccharide biosynthesis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  137 bits (345), Expect = 5e-37
 Identities = 100/354 (28%), Positives = 173/354 (48%), Gaps = 18/354 (5%)

Query: 16  YLNDCIDSGWVSSRGKYIDRFETEFAEFLKVKHATTVSNGTVALHLAMSALGITQGDEVI 75
           YL    D+GW ++ G   +    +  E+L V +   VSNGT+A+ LA     + Q    I
Sbjct: 18  YLERVHDTGWYTNFGPLHNELTEKLEEYLGVSNLLLVSNGTLAIQLAAKVFNVKQ---TI 74

Query: 76  VPTFTYVASVNTIVQCGALPVFAEIEGESLQVSVEDVKR--KINKKTKAVMAVHIYGQAC 133
              F++VA+ ++++  G    +++IE  SL +  E++++  K N    +++A H+YG  C
Sbjct: 75  TTPFSFVATSSSLLWQGIDLAYSDIERSSLNICPEELEKNWKSNDSYDSLLATHVYGNPC 134

Query: 134 DIQSLRDLCDEHGLYLIEDCAEAIGTAVNGKKVGTFGDVSTFSFFGNKTITSGEGGMVVS 193
           D+Q + ++  ++   ++ D A A G  V  K V +FGD ST SF   K   + EGG V+ 
Sbjct: 135 DVQKIDEIAKKYNKKIMYDAAHAFGIKVGNKSVLSFGDASTLSFHATKVFHTVEGGAVIF 194

Query: 194 NSDIIIDKCLRLKNQGVVAGKRYWHDLVAYNYRMTNLCAAIGVAQLERVDKIIKRKRDIA 253
                 D+   L N G+             N ++    AA+G+  LE +D II  + ++ 
Sbjct: 195 KDRNHFDEAKSLINFGIQNDGTL--GTPGINAKLNEYQAAVGLCLLESIDDIICHRSNLF 252

Query: 254 EIYRSELAG---LPMQVHKESNGTFHSYWLTSIILDQEFEVHRDGLMTFLENNDIESRPF 310
           EIYR EL+    LP+  H++SN  ++  ++  +      EV R  +   L+ N+I+ R +
Sbjct: 253 EIYRKELSNVIELPLW-HRDSN--YNGAYMPIL---PSTEVERLKIGEQLKANNIQFRRY 306

Query: 311 FYPAHTLPMYEHLAEKTAFPLSNSYSHRGINLPSWPGLCDDQVKEICNCIKNYF 364
           FYP  +L       +    P+SN  +   + LP    +  + V +I   IK  +
Sbjct: 307 FYP--SLDKAYLRVKSFNCPVSNYIAENALCLPLHMYMTKEDVLKITATIKEIY 358