Pairwise Alignments

Query, 367 a.a., perosamine synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., polysaccharide biosynthesis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  168 bits (426), Expect = 2e-46
 Identities = 97/240 (40%), Positives = 143/240 (59%), Gaps = 10/240 (4%)

Query: 34  DRFETE-----FAEFLKVKHATTVSNGTVALHLAMSALGITQGDEVIVPTFTYVASVNTI 88
           DR++T        E + VKHA  +S+GT AL  AM A GI  GDEVIVP FT+VASV  I
Sbjct: 35  DRWKTRDMEQLLCEKMNVKHAHLLSSGTAALQTAMMAAGIGAGDEVIVPPFTFVASVEAI 94

Query: 89  VQCGALPVFAEIEGESLQVSVEDVKRKINKKTKAVMAVHIYGQACDIQSLRDLCDEHGLY 148
              GA+P+FAEI+ E+L +S E ++  I  +TKA+  VH+ G    +  ++ +C +H L 
Sbjct: 95  FMAGAVPIFAEID-ETLCLSPEGIEAVITPRTKAINLVHMCGSMAKMDEIKAICKKHNLV 153

Query: 149 LIEDCAEAIGTAVNGKKVGTFGDVSTFSFFGNKTITSGEGGMVVSNSDIIIDKCLRLKNQ 208
           L+ED  +AIG +  G+ +GT GDV  +SF   KTIT GEGG V++N+  I D      + 
Sbjct: 154 LLEDACQAIGGSYKGQALGTIGDVGCYSFDSVKTITCGEGGAVITNNTEIYDNAHMFSDH 213

Query: 209 G-VVAGK---RYWHDLVAYNYRMTNLCAAIGVAQLERVDKIIKRKRDIAEIYRSELAGLP 264
           G    GK      H ++  N+R++ + AA+G+AQL ++D II  +R   +  +  +A +P
Sbjct: 214 GHDHIGKDRGAESHPIMGLNFRISEMNAALGLAQLRKLDTIIDIQRKNKKAIKDAMASIP 273