Pairwise Alignments

Query, 367 a.a., perosamine synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., polysaccharide biosynthesis protein (RefSeq) from Shewanella sp. ANA-3

 Score =  171 bits (434), Expect = 2e-47
 Identities = 115/374 (30%), Positives = 192/374 (51%), Gaps = 28/374 (7%)

Query: 1   MIPVYEPSLDGNERKYLNDCIDSGWVSSRGKYIDRFETEFAEFLKVKHATTVSNGTVALH 60
           MIP     +D  +   + + ++S +++ +G  +  FE    ++        V++ T ALH
Sbjct: 1   MIPYGRQDIDSTDIAAVVEVLESDFLT-QGPKVPEFENAVCDYTGANFGVAVNSATSALH 59

Query: 61  LAMSALGITQGDEVIVPTFTYVASVNTIVQCGALPVFAEIE-------GESLQVSVEDVK 113
           +A  ALGI QGD V     T+VAS N  + CGA   F +++        ++L + +   K
Sbjct: 60  IACLALGIGQGDLVWTSPITFVASANCALYCGAEVDFVDVDPATGNMCSQALAIKLAQAK 119

Query: 114 RKINKKTKAVMAVHIYGQACDIQSLRDLCDEHGLYLIEDCAEAIGTAVNGKKVGT--FGD 171
                  K V+ VH+ G +CD+ ++  L  E+G  +IED +  IG    G K+G+  + D
Sbjct: 120 -VTGTLPKVVIPVHLCGHSCDMAAIASLAAEYGFRVIEDASHGIGGGFQGHKLGSCYYSD 178

Query: 172 VSTFSFFGNKTITSGEGGMVVSNSDIIIDKCLRLKNQGVV----------AGKRYW--HD 219
           ++ FSF   K IT  EGGM ++NS  + +K   L++ G+V           G  Y+  H+
Sbjct: 179 ITVFSFHPVKIITCAEGGMAMTNSAELAEKLRLLRSHGIVRLPQQMLRPNEGDWYYEQHE 238

Query: 220 LVAYNYRMTNLCAAIGVAQLERVDKIIKRKRDIAEIYRSELAGLPMQVHKESNGTFHSYW 279
           L  +NYRMT L AA+GV+Q++R+D  +KR+ ++A  YR  L+ L   +  ES     S W
Sbjct: 239 L-GFNYRMTELQAALGVSQMKRIDAFVKRRNELANRYRQGLSSLCHCL--ESLAGSDSAW 295

Query: 280 LTSIILDQEFEVHRDGLMTFLENNDIESRPFFYPAHTLPMYEHLAEKTA-FPLSNSYSHR 338
              II  ++ + HR  +   +    I+    ++P H  P Y +   K   FP++  +  R
Sbjct: 296 HLLIICLRD-KSHRKHIFDDMRAAGIQVHVHYFPVHLQPFYMNKGFKQGQFPVAEDFYSR 354

Query: 339 GINLPSWPGLCDDQ 352
            ++LP +PGL ++Q
Sbjct: 355 ILSLPLFPGLTEEQ 368