Pairwise Alignments

Query, 373 a.a., GDP-mannose 4,6-dehydratase from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., GDP-mannose 4,6-dehydratase (NCBI) from Rhodospirillum rubrum S1H

 Score =  470 bits (1210), Expect = e-137
 Identities = 232/352 (65%), Positives = 278/352 (78%), Gaps = 10/352 (2%)

Query: 1   MNKKVALITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFK 60
           M  KVALITG+TGQDG+YLAEFLL KGYEVHGIKRRSS  NT R+D LY+DPH+ D  F 
Sbjct: 1   MAAKVALITGVTGQDGAYLAEFLLGKGYEVHGIKRRSSSLNTGRIDPLYQDPHDPDRTFF 60

Query: 61  LHYGDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAIRF 120
           LHYGD+TDS+NL  ++  +QPDE+YNL AQSHV VSF+ PEYTA+ DA+GTLRLLEAIR 
Sbjct: 61  LHYGDMTDSANLIGLVQAIQPDEIYNLAAQSHVQVSFEIPEYTANADAVGTLRLLEAIRL 120

Query: 121 LGLTKKTKFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKMYAYWITINYRESYGIYA 180
           LGLT KT+FYQASTSELYG V+E PQ ETTPFYPRSPYA AK+YAYWIT+NYRE+YGI+A
Sbjct: 121 LGLTDKTRFYQASTSELYGKVRETPQSETTPFYPRSPYAAAKLYAYWITVNYREAYGIHA 180

Query: 181 CNGILFNHESPRRGETFVTRKITRGMANIAQGLEKCLFMGNLDALRDWGHAKDYVKMQWM 240
            NGILFNHESP RGETFVTRKITR +A I  GL+  L++GNLD+ RDWGHA+DYVK  W 
Sbjct: 181 SNGILFNHESPLRGETFVTRKITRAVAAIHLGLQDVLYLGNLDSWRDWGHARDYVKGMWA 240

Query: 241 MLQQDEPRDFVIATGVQYSVREFIDMSARELGIELEFVGKGVDEKAVVKSVIGTKAPAIK 300
           MLQQ  P D+V+ATGV +SVR F++M+  +LG  + + G+GVDE   + S  G K     
Sbjct: 241 MLQQPRPDDYVLATGVVHSVRAFVEMAFSKLGRRVTWQGEGVDEIG-IDSASGAK----- 294

Query: 301 VGDIIVAVDPAYFRPAEVETLLGDPSLAKKELGWVPEITLQQMVSEMVASDL 352
               +VA+DP YFRP EVE L GDP+ A++ LGWV E  L ++V+EMVA+DL
Sbjct: 295 ----LVAIDPRYFRPTEVEFLQGDPTKARERLGWVAETPLAELVAEMVAADL 342