Pairwise Alignments

Query, 373 a.a., GDP-mannose 4,6-dehydratase from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., GDP-mannose 4,6-dehydratase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  452 bits (1163), Expect = e-132
 Identities = 228/358 (63%), Positives = 273/358 (76%), Gaps = 15/358 (4%)

Query: 4   KVALITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFK--- 60
           K ALI+GITGQDGSYLAEFLL+KGYEVHGI RRSS FNT R++HLY D    D+  K   
Sbjct: 2   KTALISGITGQDGSYLAEFLLQKGYEVHGILRRSSSFNTGRIEHLYFDEWVRDMKQKRTI 61

Query: 61  -LHYGDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAIR 119
            LHYGD+TDSS+L RI+ +VQPDE+YNL AQSHV VSF  PEYTA+ DAIGTLR+LEA+R
Sbjct: 62  NLHYGDMTDSSSLIRIIQQVQPDEIYNLAAQSHVKVSFDVPEYTAEADAIGTLRMLEAVR 121

Query: 120 FLGLTKKTKFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKMYAYWITINYRESYGIY 179
            LGL  KT+ YQASTSEL+G VQE+PQKETTPFYPRSPY VAK Y +WIT NYRESYG++
Sbjct: 122 ILGLETKTRIYQASTSELFGKVQEVPQKETTPFYPRSPYGVAKQYGFWITKNYRESYGMF 181

Query: 180 ACNGILFNHESPRRGETFVTRKITRGMANIAQGLEKCLFMGNLDALRDWGHAKDYVKMQW 239
           A NGILFNHES RRGETFVTRKI+   A IAQG +  L++GNLDA RDWG+AKDYV+  W
Sbjct: 182 AVNGILFNHESERRGETFVTRKISLAAARIAQGEQDKLYLGNLDARRDWGYAKDYVECMW 241

Query: 240 MMLQQDEPRDFVIATGVQYSVREFIDMSARELGIELEFVGKGVDEKAVVKSVIGTKAPAI 299
           ++LQ D P DFVIATG  ++VREF  ++ +E GIEL + G+GVDEK +           +
Sbjct: 242 LILQHDVPEDFVIATGEMHTVREFATLAFKEAGIELRWEGEGVDEKGI----------DV 291

Query: 300 KVGDIIVAVDPAYFRPAEVETLLGDPSLAKKELGWVPEIT-LQQMVSEMVASDLEQAQ 356
             G ++V VDP YFRPAEVE LLGDP+ A+  LGW P  T   ++VS MV  D+E+ +
Sbjct: 292 ATGKVLVEVDPKYFRPAEVEQLLGDPTKARTLLGWNPRKTSFGELVSIMVRHDMEKVR 349