Pairwise Alignments

Query, 590 a.a., polysaccharide deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., Glycosyl transferase, group 1 (NCBI) from Rhodospirillum rubrum S1H

 Score = 55.5 bits (132), Expect = 4e-12
 Identities = 58/238 (24%), Positives = 93/238 (39%), Gaps = 35/238 (14%)

Query: 68  LVYLIKKHQIQLVHAHSRASSWSCHIACRLTNTPMVTTVHGRQP-----VHVSRKKFHAM 122
           L  LI++  + LVHA SRA +WS   A R    P VTT HG          ++  K    
Sbjct: 101 LTKLIEREGVWLVHARSRAPAWSALWAARRAGVPFVTTFHGTYTPGPFGAKLAYNKVMTQ 160

Query: 123 GDKALPVCEAIREQLIKDLNVPESQLHVSRNGIETSIFK--RSAAPN-----------NP 169
           GD+ + +   I + +     + +S + V   GI+  +F   R +A             + 
Sbjct: 161 GDRVIAISHFIADHIRATYEMDDSLIRVVHRGIDIDVFNPDRVSAERMIRLCTRWRLADG 220

Query: 170 KPVISIIGRLSGPKGELCY--------RLLTECL--DLDRYQVQVITGTPLTERFSALQD 219
            PV+ + GRL+  KG+           R    CL    D+ +V          R   + D
Sbjct: 221 APVVMLPGRLTRWKGQSVLIEALARLKRRDVRCLLVGSDQGRVGYRDSLIALARKRGVAD 280

Query: 220 KVSFPGYSANVEQIMAQSDLVIGA-------GRVAMEALLCGRPTLAIGEASCVGIIE 270
           +V       ++      +D+V+ A       GRV  E    GRP +A    +   I++
Sbjct: 281 QVHIVDDCDDMAAAYMVTDVVVSASTDPEAFGRVVAEGQAMGRPVIAPAHGAAPEILK 338