Pairwise Alignments

Query, 590 a.a., polysaccharide deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., polysaccharide deacetylase from Pedobacter sp. GW460-11-11-14-LB5

 Score = 73.9 bits (180), Expect = 8e-18
 Identities = 60/228 (26%), Positives = 108/228 (47%), Gaps = 27/228 (11%)

Query: 344 QREVPIIMYHRF---IRDDSEKGVHGTYLHVQQLEKHFQLLKKMGFETLTFKDLSEKGFI 400
           +REVP++ YH+    I  DS++  H   +   + ++H ++L   G+ ++   D      +
Sbjct: 55  RREVPVLCYHQIRNNIATDSKRA-HDDIIAPDKFKEHMKMLADSGYHSI-LPDQLYNYLV 112

Query: 401 HRLQPGKRFIIITVDDGYRDNYDLLLPLLKKYQFKAVVYVVTGENFNRWDVEVSDNPEKV 460
           +  +  ++ I+IT DD   D + +    LKK+ FK V +++T          VS   +  
Sbjct: 113 YGAKLPEKPIMITFDDTDEDQFTIGNTTLKKHGFKGVYFIMT----------VSIGRKGR 162

Query: 461 VPLMSPEQVKALHDSGLVEIGGHTMTHPFLSKLSESEQREEILRNKLELEALIGEPLTSF 520
           +  M+ EQ+K L D G   I  HT  H   ++ ++ +   +I     +LE + G+ +  F
Sbjct: 163 INYMTKEQIKQLSDEGNT-IASHTYDHKNFAQFTDEDWTSQIDAPTKKLEEITGKKVEYF 221

Query: 521 AYPYGDHDATSKQLAQDLGYPFAVATNSG-----PLLMHQDPYQIRRI 563
           AYPYG   A++    ++ G+  A   ++      PL      Y IRRI
Sbjct: 222 AYPYGVFKASTLHKLKEHGFKAAFILSTARDENYPL------YTIRRI 263