Pairwise Alignments

Query, 590 a.a., polysaccharide deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., chitin deacetylase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 55.5 bits (132), Expect = 3e-12
 Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 7/126 (5%)

Query: 410 IIITVDDGYRDNYDLLLPLLKKYQFKAVVYVVTGENFNRWDVEVSDNPEKVVPLMSPEQV 469
           I  T DDG  ++Y LL+P L+K  F+   + V G N N+ +  ++D      P     Q+
Sbjct: 38  ISYTFDDGLAEHYTLLVPQLEKRGFRGTFW-VCGSNINKDNENITDTTRMTWP-----QL 91

Query: 470 KALHDSGLVEIGGHTMTHPFLSKLSESEQREEILRNKLELEALIGEPLTSFAYPYGDHDA 529
           K + D+G  EI  H   H   ++    E +E+I +N   + A  G    +F YP  +  A
Sbjct: 92  KEMADNG-HEISNHGWAHKNFARFPIEEIKEDIFKNDSAIFANTGVMPRTFCYPNNNKKA 150

Query: 530 TSKQLA 535
             +++A
Sbjct: 151 EGRRIA 156