Pairwise Alignments

Query, 349 a.a., lipopolysaccharide biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) from Pseudomonas fluorescens FW300-N2E2

 Score = 43.9 bits (102), Expect = 6e-09
 Identities = 68/285 (23%), Positives = 111/285 (38%), Gaps = 17/285 (5%)

Query: 31  KTAVIRHAALGDQVIVRPFLVEARKFFPNAEITLVTVSNYL-YGTPSDLADKTV---IMK 86
           +  +I+ ++LGD V   P L +A +  P  +   V    +    T      K V   I +
Sbjct: 2   RVLLIKTSSLGDVVHTLPALTDAARAIPGIKFDWVVEEGFAEIPTWHPAVGKVVPVAIRR 61

Query: 87  SRDDSKQLSLRQKWQDYNQ---LEAQDIIFDVAGTNRSYWMTLLTKAK---LKVGFPYKP 140
            R +  Q     +W+ + Q    E  D++ D  G  +S W+T   KA    L      +P
Sbjct: 62  WRKNLWQTIKSGEWRRFKQSVRAEKYDLVIDAQGLLKSAWLTRYVKAPVAGLDKNSAREP 121

Query: 141 FLCGTLYN--LAVFRSDFQPEVECMLDMLKILGHNPSYPLDFAYPDNRQI-CDHAAPYIV 197
            L    Y+  LAV R     E    L  L +    P    ++    +R +      PY+V
Sbjct: 122 -LAARFYSRRLAVARGQHAVERVRQLFALALGYDLPQTLGNYGLNVDRLVELPRPYPYVV 180

Query: 198 YFSGASQLRKILTKPEMRAVIEQTIQQQPNVKHVFLEGKNEFEKGEYLQDLADNGSLTIQ 257
           +  G +   K   +   R + E+  Q    VK   L   N  EK    +      +  + 
Sbjct: 181 FLHGTTWESKHWPELYWRQLTERMGQFGVVVK---LPWGNPAEKARAERIANGLRNALVL 237

Query: 258 PCLPLDDLVTFIAKATLVIAPDTGIRNVAISTHTPTVGIFYATVP 302
           P L L  +   +A A   +A DTG+ ++A +   PT+ +   T P
Sbjct: 238 PKLNLGGMGKVLAGAQACVAVDTGLGHLAAALDVPTISLLGPTNP 282