Pairwise Alignments

Query, 349 a.a., lipopolysaccharide biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., Glycosyl transferase, family 9 from Pseudomonas syringae pv. syringae B728a

 Score = 44.7 bits (104), Expect = 4e-09
 Identities = 63/285 (22%), Positives = 112/285 (39%), Gaps = 17/285 (5%)

Query: 31  KTAVIRHAALGDQVIVRPFLVEARKFFPNAEITLVTVSNYL----YGTPSDLADKTVIMK 86
           +  +I+ ++LGD +   P L +A +  P      V    +     +    D      I +
Sbjct: 2   RVLLIKTSSLGDVIHALPALTDAARALPGIRFDWVVEEGFAEIPAWHPAVDRVIPVAIRR 61

Query: 87  SRDDSKQLSLRQKWQDYNQL---EAQDIIFDVAGTNRSYWMTLLTKAK---LKVGFPYKP 140
            R    Q     +W+ + Q    +  D++ D  G  +S W+T   +A    L      +P
Sbjct: 62  WRKHLWQTFRSGEWRRFKQQVREQRYDLVIDAQGLFKSAWLTRYVEAPVAGLDRDSAREP 121

Query: 141 FLCGTLYNLAVFRSDFQPEVECMLDML-KILGH-NPSYPLDFAYPDNRQICDHA-APYIV 197
            +    Y+ A   +  Q  VE +  +  + LG+  PS   D+       + D   AP+++
Sbjct: 122 -VASRFYDRAFPVARGQHAVERLRQLFAQALGYPQPSGMGDYGLKPLATLDDSLQAPFVL 180

Query: 198 YFSGASQLRKILTKPEMRAVIEQTIQQQPNVKHVFLEGKNEFEKGEYLQDLADNGSLTIQ 257
           +  G +   K   +   R + E    +   V+   L   N  EK    +      S  + 
Sbjct: 181 FLHGTTWDTKHWPELYWRQLAELMAARGLQVQ---LPWGNPAEKARAERIAEGLSSAHVL 237

Query: 258 PCLPLDDLVTFIAKATLVIAPDTGIRNVAISTHTPTVGIFYATVP 302
           P L L  +   +A A   +A DTGI ++A +   PT+ +F  T P
Sbjct: 238 PKLNLAGVARVLASAQACVAVDTGIGHLAAALDVPTISLFGPTNP 282