Pairwise Alignments

Query, 439 a.a., 3-deoxy-D-manno-octulosonic acid transferase from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., 3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  330 bits (846), Expect = 5e-95
 Identities = 185/415 (44%), Positives = 249/415 (60%), Gaps = 8/415 (1%)

Query: 23  LLTLAAPFLLYGLYRRRQGKPSVGKRWKEHFGITPPLKTTTPPIWIHAASVGETLAVTPL 82
           L  L  P +   L+ R +  P+  +R  E F    P+      IW+HA SVGE++A  P+
Sbjct: 1   LFYLGLPLVAIRLWLRARKAPAYARRIGERFSWGLPVMLPGG-IWVHAVSVGESIAAAPM 59

Query: 83  IKQIKQRSPNTPILLTTTTPTGAEQAEKL---ADWVEHRYTPIDFSFAVRGFLRRVRPCQ 139
           I+ + QR P  PI +T  TPTG+E+   L      ++H Y P D   A + FL RVRP  
Sbjct: 60  IRALLQRYPQLPITVTCMTPTGSERIRALFANEPRIQHCYLPYDLPCAAKRFLDRVRPSL 119

Query: 140 LIIVETELWPNTLHTVAKAGLPITLVNARLSEKSYRGYQRIHPFFNSMAKPLSLVLCQFA 199
            +I+ETELWPN +H  A+ G+P+ L NARLSE+S RGY R       M   +SL   Q  
Sbjct: 120 AVIMETELWPNHIHQCARRGIPVALANARLSERSARGYARFPKLTRPMLAEMSLFAVQTD 179

Query: 200 DDAQRFIQLGVAETKIKITGSIKFDINITYEVIAQGEALRTA-LGKHRPVWIAASTHQGE 258
            +A+RF QLG     +++TGSIKFD+ I  +++    ALR       RPVWIAASTH+GE
Sbjct: 180 AEAERFRQLGARVETVEVTGSIKFDLTIDPQLLEDASALRRQWQATERPVWIAASTHEGE 239

Query: 259 DEIVLAAHQEILKQHPNALLILVPRHPERFAAVHKLAASL-FSVQTRSSQQTITSDTQVY 317
           DE+VLAAH+ +L  +P+ALLILVPRHPERF AVH+L  S   +   RSS Q +T+   V 
Sbjct: 240 DEVVLAAHRRLLDSYPDALLILVPRHPERFDAVHQLCVSEGLATVRRSSGQPVTAQVSVL 299

Query: 318 LGDTMGEMLVLLGASDVCFMGGSLVGKKVGGHNLLEPAALAKPIVTGPSFYNFTDITHAL 377
           LGDTMGE+L L   +D  F+GGSLV    GGHNLLEPAALAKP+++GP  +NF +I   L
Sbjct: 300 LGDTMGELLFLYALADSAFVGGSLVPN--GGHNLLEPAALAKPVLSGPHVFNFLEIAAQL 357

Query: 378 INAHACVIADQPETIAKQVNHWFSDAQERQQCGKNALAIVMQNRGALENTLTELG 432
             A A    +  E++A  V   F   ++ Q+  +  L ++  N+GAL+  L  LG
Sbjct: 358 RAAGALAEVEDAESLALAVQRLFELPRDAQRMAEAGLKVMRSNQGALQRLLEGLG 412