Pairwise Alignments

Query, 439 a.a., 3-deoxy-D-manno-octulosonic acid transferase from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., 3-deoxy-D-manno-octulosonic-acid (KDO) transferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  292 bits (747), Expect = 2e-83
 Identities = 170/422 (40%), Positives = 240/422 (56%), Gaps = 8/422 (1%)

Query: 15  LLRTLYTLLLTLAAPFLLYGLYRRRQGKPSVGKRWKEHFGITPPLKTTTPPIWIHAASVG 74
           + R LY++LL L +P L+  L +R    P    RW E FG+   + T    I IH+ S+G
Sbjct: 1   MARLLYSVLLYLLSPLLVLYLAQRAIKSPDYRGRWGERFGLKALMPTD---ILIHSVSMG 57

Query: 75  ETLAVTPLIKQIKQRSPNTPILLTTTTPTG-AEQAEKLADWVEHRYTPIDFSFAVRGFLR 133
           ETLA  PLI+ I    PN  I +TT++PTG AE  +   D V+H Y P D  FAV  FL 
Sbjct: 58  ETLAAIPLIRAIMAARPNLRITVTTSSPTGSAEVIKAFGDRVQHCYLPFDLGFAVNRFLS 117

Query: 134 RVRPCQLIIVETELWPNTLHTVAKAGLPITLVNARLSEKSYRGYQRIHPFFNSMAKPLSL 193
           ++   +LII+ETELWPN +      G+ ++L+NARLSEKS   YQ+       M + L  
Sbjct: 118 QLGCAELIIMETELWPNLIAGARARGIKVSLLNARLSEKSAASYQKFASLTVPMLRSLDQ 177

Query: 194 VLCQFADDAQRFIQLGVAETKIKITGSIKFDINITYEVIAQGEALRTALGK-HRPVWIAA 252
           +  Q   +A+RF+ LGV  +++ + GS+KFDI I          LR + G+    +W+A 
Sbjct: 178 IAVQTTKEAERFVALGVDASRVHVCGSLKFDIQIPPSRRESARQLRQSWGRDDHLIWVAG 237

Query: 253 STHQGEDEIVLAAHQEILKQHPNALLILVPRHPERFA-AVHKLAASLFSVQTRSSQQTIT 311
           S H GE + +L+AH ++L+Q P+ALLI+VPRHPE+FA A   +      +  RS  +  T
Sbjct: 238 SVHPGEFDTMLSAHHQLLEQFPDALLIMVPRHPEQFANAARAIRERGLQLAVRSMGEAPT 297

Query: 312 SDTQVYLGDTMGEMLVLLGASDVCFMGGSLVGKKVGGHNLLEPAALAKPIVTGPSFYNFT 371
             TQV LGDTMGE+L   GA+D+ F+GG+LV    GGHN LEPAA+  P+  GP+ ++F 
Sbjct: 298 VGTQVLLGDTMGELLTWYGAADLAFVGGTLVVN--GGHNPLEPAAMGLPVAMGPNHWDFK 355

Query: 372 DITHALINAHACVIADQPETIAKQVNHWFSDAQERQQCGKNALAIVMQNRGALENTLTEL 431
           +IT  L  A    +   P+     +     D+  R   G+  L +V  NRGAL   L  L
Sbjct: 356 EITELLQQAGNLTLCATPDAFNDWLLATAQDSVGRLTAGEAGLRVVESNRGALSRQLAVL 415

Query: 432 GF 433
           G+
Sbjct: 416 GY 417