Pairwise Alignments

Query, 439 a.a., 3-deoxy-D-manno-octulosonic acid transferase from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  305 bits (780), Expect = 2e-87
 Identities = 174/411 (42%), Positives = 243/411 (59%), Gaps = 8/411 (1%)

Query: 17  RTLYTLLLTLAAPFLLYGLYRRRQGKPSVGKRWKEHFGITPPLKTTTPPIWIHAASVGET 76
           RTLY+ LL L +P L+  L  R    P    RW E FG++     +   + IH+ S+GET
Sbjct: 3   RTLYSALLYLLSPLLILYLAIRAIKSPDYRGRWGERFGLST---LSRADLLIHSVSMGET 59

Query: 77  LAVTPLIKQIKQRSPNTPILLTTTTPTG-AEQAEKLADWVEHRYTPIDFSFAVRGFLRRV 135
           LA  PLIKQI+   P   I +TTT+PTG AE  +  A  V+H Y P D    V  FL ++
Sbjct: 60  LAAIPLIKQIQAAYPELSITITTTSPTGSAEVIKAFAGSVQHCYLPFDLPLCVARFLSQL 119

Query: 136 RPCQLIIVETELWPNTLHTVAKAGLPITLVNARLSEKSYRGYQRIHPFFNSMAKPLSLVL 195
           +P Q+II+ETELWPN +H   + G+ + L NARLSEKS   Y+        M + L L+ 
Sbjct: 120 QPKQIIIMETELWPNLIHQAKRRGIRLMLANARLSEKSANQYRGRPKLSLPMLRSLDLIA 179

Query: 196 CQFADDAQRFIQLGVAETKIKITGSIKFDINITYEVIAQGEALR-TALGKHRPVWIAAST 254
            Q    AQRFI LGV    +K+TGS+KFD+ I  +++ + + LR T      PVW+A S 
Sbjct: 180 AQSPQAAQRFIDLGVEAEPVKVTGSLKFDLTIAPDLLEKAKELRKTWQRMETPVWVAGSV 239

Query: 255 HQGEDEIVLAAHQEILKQHPNALLILVPRHPERF-AAVHKLAASLFSVQTRSSQQTITSD 313
           H GE +I+LAAH+ +L + P+ALL+LVPRHPE+F AA  ++ A+   +  RS Q  +   
Sbjct: 240 HPGEFDIMLAAHKSLLIRFPHALLVLVPRHPEQFDAAASRVKAAGLVLARRSKQDAVDDQ 299

Query: 314 TQVYLGDTMGEMLVLLGASDVCFMGGSLVGKKVGGHNLLEPAALAKPIVTGPSFYNFTDI 373
           TQV LGDTMGE+L   GA+D  F+GG+L+  + GGHN LEPAA+  P+  GP  ++F +I
Sbjct: 300 TQVLLGDTMGELLSFYGAADQAFVGGTLI--ENGGHNPLEPAAIGLPVYVGPHHWDFAEI 357

Query: 374 THALINAHACVIADQPETIAKQVNHWFSDAQERQQCGKNALAIVMQNRGAL 424
           T  L  A +  +    + +A+Q+ H F D        +  L +V  N+GAL
Sbjct: 358 TGLLKEAGSLALVQDADELAQQLVHKFDDKAAYLVAREAGLEVVEANKGAL 408