Pairwise Alignments

Query, 247 a.a., capsular biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  308 bits (789), Expect = 6e-89
 Identities = 152/244 (62%), Positives = 181/244 (74%), Gaps = 5/244 (2%)

Query: 1   MIVIPMAGMSSRFFKAGYTQPKYMLEAHGQTLFEHSVNSFAAYFASTPFLFIVRNVYDTA 60
           MIVIPMAG+SSRFF AGYTQPKYML+A G  LF+H++ SFAAYF +TPFLFIVR++YDTA
Sbjct: 1   MIVIPMAGLSSRFFNAGYTQPKYMLDAGGMPLFDHALLSFAAYFGTTPFLFIVRDLYDTA 60

Query: 61  VFVREKATQLGIKQFYIAELHTETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPN 120
            FV+ +   LGIK F I  L   TRGQAETV LGL ++A         +T+FNIDTFRP 
Sbjct: 61  AFVKTRCKALGIKDFKIVALEQPTRGQAETVYLGLTDVADTE-----PLTIFNIDTFRPG 115

Query: 121 FVFPDISQHSDGYLEVFQGGGDNWSFAKPEHAGSTKVIQTAEKNPISDLCSTGLYHFNRK 180
           F  P I+  +DGYLEVF+G G NWS+AKP  A ST+V+QT EK PISDLCSTGLY+F + 
Sbjct: 116 FTLPPIADTADGYLEVFKGEGSNWSYAKPADAKSTRVVQTTEKQPISDLCSTGLYYFRQT 175

Query: 181 EDYLEAYREYVARPSQEWERGELYIAPLYNLLIQKGLNIHYHLIARHEVIFCGVPDEYTD 240
            D+  AY    ARP+ EW++ ELYIAPLYN LI +G NIHYHLI   +VIFCGVP+EY  
Sbjct: 176 ADFRLAYETEAARPASEWQKQELYIAPLYNHLIARGKNIHYHLIDASDVIFCGVPEEYQA 235

Query: 241 FLRQ 244
            L Q
Sbjct: 236 LLAQ 239