Pairwise Alignments

Query, 247 a.a., capsular biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  301 bits (771), Expect = 8e-87
 Identities = 147/242 (60%), Positives = 178/242 (73%), Gaps = 4/242 (1%)

Query: 1   MIVIPMAGMSSRFFKAGYTQPKYMLEAHGQTLFEHSVNSFAAYFASTPFLFIVRNVYDTA 60
           MIVIPMAG+SSRFFK GY QPKYML AHG +LFEHSV SF  YF S  F+FIVR+ Y+T 
Sbjct: 1   MIVIPMAGLSSRFFKEGYEQPKYMLLAHGLSLFEHSVKSFEKYFKSEEFIFIVRDSYETP 60

Query: 61  VFVREKATQLGIKQFYIAELHTETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPN 120
            FVR+K+  LGIK F I  LH  T+GQAETV LGL+E+ K     +  IT+FNIDTFRP 
Sbjct: 61  NFVRKKSEILGIKNFKIIVLHENTKGQAETVFLGLKEINKT----EEPITIFNIDTFRPG 116

Query: 121 FVFPDISQHSDGYLEVFQGGGDNWSFAKPEHAGSTKVIQTAEKNPISDLCSTGLYHFNRK 180
           F++P++    DGYLEVFQG GDNWSF +     +T +  T EK PIS LC TGLY+F   
Sbjct: 117 FIYPELEALGDGYLEVFQGEGDNWSFVRAISNETTLIDLTTEKKPISKLCCTGLYYFKSS 176

Query: 181 EDYLEAYREYVARPSQEWERGELYIAPLYNLLIQKGLNIHYHLIARHEVIFCGVPDEYTD 240
           +DY++AY  Y+  P +EWE+GELY+APLYN LI+K   IHY+LI+R +VIFCGVP EY D
Sbjct: 177 KDYIDAYDNYIRLPIEEWEKGELYVAPLYNYLIRKNKKIHYNLISREDVIFCGVPSEYKD 236

Query: 241 FL 242
           FL
Sbjct: 237 FL 238