Pairwise Alignments

Query, 309 a.a., LPS biosynthesis protein WavE from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  181 bits (458), Expect = 3e-50
 Identities = 121/285 (42%), Positives = 154/285 (54%), Gaps = 14/285 (4%)

Query: 2   IKIDDEAITFVVQGPVQASASRQQIAGITEQCLNSIRRFFPKSTIILSTWKGQPLDGLDY 61
           IK  D  IT VVQGPVQA   R Q AGIT+ CL+SIR   P + IILSTW+GQ   GL  
Sbjct: 3   IKFSD--ITVVVQGPVQAYQGRDQQAGITQVCLDSIRTHLPGARIILSTWEGQNCTGLAP 60

Query: 62  DQVLELDDPGANTVFYD--GQPIKLNNNRQMYSTHMGLKAVKTPYAVKLRTDNLLTGRQF 119
           D +L+  DPGAN V Y+  G+  KLN NRQ+ ST  GLK V+TPYAVKLR+DN LTG  F
Sbjct: 61  DLLLQHPDPGANVVAYNAQGEAQKLNFNRQIVSTCEGLKRVETPYAVKLRSDNYLTGHGF 120

Query: 120 VELYERYADLPRAQNYQFLTQRVLTSSTFFISSHYGHPVHFHKSDLFDFGLTQDLLTIWS 179
           V   E++    R       T+ V+ ++++F     G  V  H SD F FG T+DLL IW 
Sbjct: 121 VTALEQFP--ARCDQDIRFTEPVVVNTSYFRRYAEGQRVIMHPSDFFHFGRTEDLLKIWD 178

Query: 180 DRWIPELHFTLKPGYKARH-------PATEQVLCLNWISALLDEEHHIESKTCDHAGLGE 232
                +  F      KA++       P  EQ+ C  W+  L D    +  +    A  GE
Sbjct: 179 LPLFEDRPFDPAQAGKAQYHGAPLTCPHAEQIYCDLWLRRLDDGFLPLAHRHQFSANQGE 238

Query: 233 NFWPQFMANNLLMDCPENIGLDVTERFYKRGNLALEYDLKDWLHL 277
             W +FMA+NL +  PE +GL +  RF  +     E    DWL L
Sbjct: 239 R-WDRFMASNLRVLEPEQLGLGLIARFIPKAKRPNEMSHLDWLLL 282