Pairwise Alignments

Query, 251 a.a., 3-deoxy-D-manno-octulosonic acid kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., 3-deoxy-D-manno-octulosonic-acid kinase (RefSeq) from Shewanella amazonensis SB2B

 Score =  147 bits (371), Expect = 2e-40
 Identities = 83/194 (42%), Positives = 114/194 (58%), Gaps = 5/194 (2%)

Query: 38  DPSQCCNPEFWQQNGKVLGSATGRGTTWFVQLQQTQG--ALRHYRRGGLFGKLVADSYWF 95
           DPS    PE WQ    V G++ GR TTWFV+  +      LRHY RGGL  K   D Y +
Sbjct: 35  DPSHF-TPEHWQALAAVTGTSKGRYTTWFVRHPEANQDWVLRHYWRGGLMEKFSKDRYLY 93

Query: 96  TGWEKTRSYQEFMLLNHLRDAGVNVPRPIAARVQKHGLLYKADLLSEKVPNARDLVSILQ 155
           TG   TR+  E  LL  L   G  VPRP+ ARV+++ L Y AD+L E++P  RDL++ L+
Sbjct: 94  TGMANTRAIAELALLEKLHAEGFPVPRPVGARVRRYALWYSADILIERMPGCRDLLAWLE 153

Query: 156 ESPISDELYRKIGREIRKMHDAQVNHTDLNIHNILIDDQEKVWIIDFDKCYVQ-IGDSWK 214
           + P+ +  ++ +G  I + H   V H DLN  NIL   Q    +IDFD+  ++   +SW+
Sbjct: 154 QGPLDEAEWKALGVCIARFHHRGVYHADLNAKNILKGPQGFA-LIDFDRGEIRNPANSWQ 212

Query: 215 QGNLKRLKRSFEKE 228
           Q NL RL+RSF+KE
Sbjct: 213 QANLSRLRRSFDKE 226