Pairwise Alignments

Query, 251 a.a., 3-deoxy-D-manno-octulosonic acid kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., 3-deoxy-D-manno-octulosonic-acid kinase (RefSeq) from Shewanella loihica PV-4

 Score =  153 bits (387), Expect = 3e-42
 Identities = 82/190 (43%), Positives = 116/190 (61%), Gaps = 8/190 (4%)

Query: 46  EFWQQNGKVLGSATGRGTTWFV------QLQQTQGALRHYRRGGLFGKLVADSYWFTGWE 99
           ++WQ  G + GS+ GR TTWFV      Q  + +  LRHY RGG+  K   D+Y +TG +
Sbjct: 29  DYWQDLGAITGSSKGRYTTWFVNPAPLSQAPEEEWVLRHYYRGGMMEKFSRDAYLYTGLK 88

Query: 100 KTRSYQEFMLLNHLRDAGVNVPRPIAARVQKHGLLYKADLLSEKVPNARDLVSILQESPI 159
           + R+  EF LL  L   G  VP P+AA++Q+ G  Y+ D++ +++P ARDLV+ L + P+
Sbjct: 89  RCRAIAEFNLLEQLFKEGFAVPEPVAAQIQRSGPYYRGDIIIKRIPGARDLVAELSQGPM 148

Query: 160 SDELYRKIGREIRKMHDAQVNHTDLNIHNILIDDQEKVWIIDFDKCYVQIGDS-WKQGNL 218
           SDE ++ +G  I K H   V H DLN  NIL+   E   +IDFD+  ++  DS W+Q NL
Sbjct: 149 SDEKWQALGACIAKFHRRGVYHADLNAKNILLAG-ENFTLIDFDRGELKQPDSKWQQSNL 207

Query: 219 KRLKRSFEKE 228
            RL RSF KE
Sbjct: 208 DRLLRSFNKE 217